Results for "Workflows"
Blogs
List of bioinformatics workflow management tools !
...ash; a specification for describing analysis workflows and tools that are portable a...Management System geared towards scientific workflows. [ web ] Galaxy&nb...at aims to reduce the complexity of creating workflows by providing a fast and comfo...1140 days ago
List of gene ontology software and tools
...ntologies that provide largely species-neutral, comprehensive statements about what gene products do. Although extensively used in data analysis workflows, and widely incorporated into...3707 days ago
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Bookmarks
Taverna Workflow Management System
...tools used to design and execute scientific workflows. Taverna has been created by...ncludes the Taverna Engine(used for enacting workflows) that powers both the Taverna...a Command Line Tool for a quick execution of workflows from a terminal.3913 days ago
Next Generation Sequencing (NGS) Tutorials
....2134 NARWHAL, a primary analysis pipeline for NGS data http://bioinformatics.oxfordjournals.org/cgi/content/abstract/28/2/284?etoc RseqFlow: Workflows for RNA-Seq data analysis&nbs...3485 days ago
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Pages
Awesome perl frameworks, libraries and software - PART 3
...ss for the Vyatta routing suite KES777/Devel-DebugHooks - Perl debugger jonasbn/perl-workflow - Simple, flexible system to implement workflows inway/mojo-rabbitmq-client&n...2492 days ago
Top-level pages
List of bioinformatics open source projects/software.
...ool for designing and executing phylogenetic workflows AutoDock http://autodock.sc...enkins and its plug-in API to create biology workflows and manage computer clusters....workbench Tool for designing and executing workflows TGAC Browser Genome Browser...3754 days ago
Commercial and public next-gen-seq (NGS) software
...and other features. Commercial. Win or MacOS.Partek - Commercial software for NGS, microarray, and qPCR data analysis. Streamlined analysis workflows for: ChIP-Seq, RNA-Seq, DNA-S...3517 days ago
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Wire posts
News
RNA-Seq Data Pathway and Gene-set Analysis Workflows
...al., 2009) /Pahview (Luo and Brouwer, 2013) workflows on RNA-Seq data pathway...o;RNA-Seq Data Pathway and Gene-set Analysis Workflows“. First cover a full w...ene set analysis too. We also describe joint workflows, i.e. to do gene-level analys...3831 days ago
- ...Tools/wikiGalaxy Tool Shed repository: http://toolshed.g2.bx.psu.edu/view/bgruening/deeptoolsand example Galaxy workflows: http://toolshed.g2.bx.psu.edu/view/bgruening/deeptools_workflows
3463 days ago
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Opportunity posts
Research Project Posts for CSIR Project, Delhi
...ates to get involved in building algorithms and platforms for large biological data analyses in the areas of comparative genomics, computational workflows, disease association studies,...3902 days ago
MedGenome is looking for Genome Analysts
...s), ambitious and energetic who will work both independently and as part of a collaborative team to generate data from various genomics-oriented workflows and assist in the optimizatio...1218 days ago
- +5 more Opportunity posts
Tags
What are the best known workflow or tutorial for SNP calling?
Tags: SNP, Workflows, Tutorial, Single Nucleotide Polymorphisms, SNPs, Variants
3580 days ago
Sequanix: a dynamic graphical interface for Snakemake workflows
A Python library dedicated to NGS analysis (e.g., tools to visualise standard NGS formats). A set of pipelines dedicated to NGS in the form of Snakefiles (Makefile-like with Python syntax based on snakemake framework) with more than 80 re-usable rules (see Rules). Original tools to help in th...Tags: Sequanix, dynamic, graphical, interface, Snakemake, workflows
1542 days ago
Comments
Comment on "R and Bioconductor Tutorial"
...dash; Chip-Seq More at https://rc.fas.harvard.edu/kb/bioinformatics/sequencing-information/ngs-analysis-with-r/ http://bioconductor.org/help/workflows/high-throughput-sequencing/...3668 days ago
