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Next Generation Sequencing (NGS) Tutorials
...-2013.html Variant Detection (Model organism) Advanced tutorial https://docs.google.com/document/pub?id=1C...5EUzleetn0ctjmvaidPKLxM Variant Detection Introductory tutorial https://docs.google.com/document/pub?id=1Z...3501 days ago
- RNA Seq Basic Galaxy Tutorial RNA-Seq tutorial based on Trapnell et al. (2012) Nature Protocols In this tutorial we cover the concepts of RNA-Seq differenti...
3667 days ago
- ...or you can use the API for NCBI Remap. More at http://www.ncbi.nlm.nih.gov/genome/tools/remap API http://www.ncbi.nlm.nih.gov/genome/tools/remap/docs/api...
3020 days ago
- ...ntly - and especially accurately. That is, without me actually putting too much manual work into it. More at http://mira-assembler.sourceforge.net/docs/DefinitiveGuideToMIRA.html
2965 days ago
CANU: Assembling Large Genomes with Single-Molecule Sequencing and Locality Sensitive Hashing.
Canu is a fork of the Celera Assembler designed for high-noise single-molecule sequencing (such as the PacBio RSII or Oxford Nanopore MinION). The software i...2928 days ago
Bpipe - a tool for running and managing bioinformatics pipelines
Bpipe provides a platform for running big bioinformatics jobs that consist of a series of processing stages - known as 'pipelines'. January 20th, 2016 - New! Bpipe...2919 days ago
- Watch out: only a few files are counted in coverage statistics. Full documentation on Read the Docs. A set of tools for viral metagenomics. virmet is called with a command su...
2778 days ago
- pyScaf orders contigs from genome assemblies utilising several types of information: paired-end (PE) and/or mate-pair libraries (NGS-based mode) long reads (NGS-ba...
2708 days ago
- The official documentation of the Perl 6 programming language is now published! Besides online browsing and searching, you can also view everything in one file or cont...
2663 days ago
- It may take a little while to load all charts. Please be patient. All charts require an Internet connection. These examples are taken from the googleVis demo. You can...
2352 days ago
