Results for "extensions"
Blogs
Basic command-line to run BLAST
...keblastdb -in human.1.protein.faa -dbtype prot ls Note that this makes a lot of extra files, with the same name as the database plus new extensions (.pin, .psq, etc). To make bl...2257 days ago
- ...er, is written in PHP, and uses MySQL/MariaDB as a database backend, so you will need to install the Apache, MariaDB, PHP and other required PHP extensions to your server. You can insta...
724 days ago
Bookmarks
GARM:Genome Assembly, Reconciliation and Merging
...erent assemblers using the same or different sequencing technologies. When scaffolds are provided, a process of finding probable compressions or extensions (CE) problems in the assembli...2707 days ago
Meraculous: De Novo Genome Assembly with Short Paired-End Reads
...elies on an efficient and conservative traversal of the subgraph of the k-mer (deBruijn) graph of oligonucleotides with unique high quality extensions in the dataset, avoiding an e...2384 days ago
- +7 more Bookmarks
Pages
Bio++ : C Language libraries for your biological need
...bjects).Statistics: DataTable object, with I/O from CSV files, probability distributions.etc. Utils Files: working on file paths, getting file extensions and names, testing existence,...3960 days ago
Awesome perl frameworks, libraries and software - PART 3
...d memory. jmlynesjr/wxPerl-Module-Examples - wxPerl-Module-Examples not from the wxBook doy/parse-keyword - DEPRECATED: write syntax extensions in perl chromatic/Test-MockO...2507 days ago
Top-level pages
- ...o standard out, allowing it to be easily dropped into the middle of a pipeline for format conversion. Reformat autodetects formats based on file extensions and content, making it very e...
2727 days ago
Awesome perl frameworks, libraries and software - PART 1
...ge perl installations in your $HOME muennich/urxvt-perls - Perl extensions for the rxvt-unicode terminal...ll Lingua::Han:: CPAN modules eilara/Rx.pl - Microsoft Reactive Extensions clone for Perl dams/curses-t...2502 days ago
- +1 more Top-level pages
Wire posts
Opportunity posts
Postdoc Positions - Mammalian Transcriptome Evolution at SIB
...OLUTIONARY GENOMICS Center for Integrative Genomics, University of Lausanne, Switzerland Two postdoctoral positions (2 years with possible extensions up to 5 years) are available...3931 days ago
Bio-Scripts
Installing Platypus on Ubuntu !
.../s, done. Resolving deltas: 100% (729/729), done. (py27) ➜ Tools git:(master) ✗ cd Platypus (py27) ➜ Platypus git:(master) ls Dockerfile extensions LICENSE Makefile misc READ...2032 days ago
Tadpole is 250x faster than SPADes assembler !
...number of logical processors). rcomp=t Store and count each kmer together and its reverse-complement. coremask=t All kmer extensions share the same hashcode. fil...989 days ago
- +2 more Bio-Scripts
Tags
Gap filling or Contigs extensions tools !
There are many tools to perform gap filling using Illumina short reads, for example "GapFiller: a de novo assembly approach to fill the gap within paired reads" or "Toward almost closed genomes with GapFiller". There are also some tools like GAPresolution that can help to perform local re-assembl...Tags: Gap, filling, Contigs, extensions, tools
2178 days ago
