Ensembl comparative genomics resources
...used to define Ensembl Protein Families, GeneTrees and homologies for both protein-coding and non-coding RNA genes. These resources are updated frequently and have a consistent informa...3003 days ago
Linux command line exercises for NGS data processing
The purpose of this tutorial is to introduce students to the frequently used tools for NGS analysis as well as giving experience in writing one-liners. Copy the required files to your c...2889 days ago
Fancy Oneliner for Bioinformatics !!
This webpage lists some of the one-liners that we frequently use in metagenomic analyses. You can click on the following links to browse through different topics. You can copy/paste the...2874 days ago
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HTTDB - Horizontally transferred transposable elements database
...es. Despite their capacity for transposition inside genomes, they can frequently transpose the species boundar...HTT patterns, such as where in the tree of life these cases are more frequently found. This is mainly due to...2309 days ago
MimicrEE2: Genome-wide forward simulations of Evolve and Resequencing studies
...f evolving populations. MimicrEE2 enables the convenient usage of available genomic resources, supports biological particulars of model organism frequently used in E&R studies and o...2061 days ago
ALLHiC: Phasing and scaffolding polyploid genomes based on Hi-C data
The major problem of scaffolding polyploid genome is that Hi-C signals are frequently detected between allelic haplotypes and any existing stat of art Hi-C scaffolding program links the...1978 days ago
A guide to machine learning for biologists
...eview, we hope to give readers a moderate introduction to a few fundamental machine learning techniques, including the most recently created and frequently used deep neural network tech...874 days ago