Tools to detect synteny blocks regions among multiple genomes
...ertain evolutionary important genes play an important role in ev...s conservation of large-scale gene order between species pairs....is useful in studying genome duplication and evolution. It can also ai...es following the whole-genome duplication in teleost fish, by tracing t...2603 days ago
List of gene ontology software and tools
The Gene Ontology (GO) is a set of associations from biological phrases to specific genes that are either chosen by trained curators or generated automatically. GO is des..."Ten Quick Tips for Using the Gene Ontology" at http://www.plosc...St retrieves most significant Gene Ontology (GO) terms, KEGG and...3703 days ago
3938 days ago
Should you get sequenced? Not all bad genes predict disease
“What we really don’t know yet is whether the predictive aspects of the genome are going to turn out...e we are fighting against this society-wide misconception that having the bad gene means...3895 days ago
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Bio++ : C Language libraries for your biological need
C has always been a language that never attempts to tie a programmer down - it...formatics, including sequence analysis,phylogenetics, molecular evolution and population genetics.Bio++ is designed in an e...decomposition, inversion, etc.Random number generation:...3941 days ago
BioRuby :Ruby packages for biologist
BioRuby is a package of Open Source Ruby code, with classes for DNA and protein sequence analysis, alignment, da...ely high descriptive power. Classes for Multiple alignment (Bio::Alignment), Gene Ontolo...3940 days ago
3940 days ago
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Lateral Gene Transfer Is Enriched in Cancer Samples
There has been always a confusion on cancer and bacteria relationship. This is the first paper which shows lateral gene transfer causes cancer. Find more at http://www.ploscompbiol.org/article/info%3Adoi%2F10.1371%2Fjournal.pcbi.10031073933 days ago
R package for visualising GO enrichment
An R package that visualizes the GO enrichment results as word clouds and arranges them together with figures of...ts for analyses such as differential expression or clustering, where for each gene list w...3933 days ago
Structural polymorphism analysis from NGS data
The LabEx BASC (Biodiversity, Agroecosystems, Society, Climate), a network of 13 labo...ter, is seeking a bioinformatician to analyze Next Generation Sequencing (NGS) data a...between sequence variation, functional variation, gene/protei...3942 days ago
3942 days ago
The Institute for Molecular Bioscience (IMB), Bailey Lab
Pattern recognition and computational biology MEME Suite software development; gene expression; mathematical modelling; gene regulation and transcription Specialization: Pattern recognition and modelling in computational biology Link @ http://www.imb.uq.edu.au/tim-bailey3941 days ago
3941 days ago
Bioinformatician become producer/director !!!
If a Bioinformatician starts producing Hindi Bollywood movies, n...ak khoj Munna Bhai Promoter Gene se Genome tak. Maine BLAST k...jayenge Raju ban gaya Genefinder. Har Ligand jo dock ka...BLAST To Hona Hi Tha !! Meri Gene Tumhare Paas Hai Aao Databas...Maine Bhi ClustalW Kiya Hai GeneScan Ka...3912 days ago
3694 days ago
How Genes are Regulated: Transcription Factors
Each cell in our body inherits the same master copy of DNA, but different cell types...rently. Transcription Factors help influence which genes are used in which cell. Unde...model their binding to DNA and their regulation of gene expres...3888 days ago
DNA is packaged in a chromosome experiment
For more information, log on to- http://shomusbiology.weebly.com/ Download the study materials here...ates an added layer of regulatory control, which ensures correct gene expression. Nucleosomes are thought to carry epigenetically...3870 days ago
Python script to download covid genome !
#!/usr/bin/env python3 # these are the publicly available "complete" sequences # https://www.gisaid.or...en(seqs)) from Bio import Entrez allseq = {} for x in seqs: if 'gene-region' in x and x['gene-region...1129 days ago
Parse a genbank file using regular expressions
#! /usr/local/bin/perl -w $genbank = "genbank_file.txt"; open (GENBANK, $genbank) || die "canno...ANISM\s*)(.*)/) { print "Organism: $2\n"; } elsif(/(gene)(\s*)(\d*)(\.\.)(\d*)/) { print "Gene length...2910 days ago
Tryst with a Bioinformatician # Dr Altan Kara
Dr Altan Kara is a Bioinformatics specialist at the faculty of Gene Engineering and Biotechnology Institute at T...it based on this profile. Alterations in the gene, transcript, protein, and met...ou will be retired, what would you tell next generation...2355 days ago
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Expression profiling of the wheat pathogen Zymoseptoria tritici
Tags: RNAseq, gene duplication, pathogen, fungi, host adaptation, Wheat
3624 days ago