Comment on "Sibelia: A comparative genomics tool"
Basic usage =========== In this manual it is assumed that "Sibelia" is properly installed and the directory with "Sibelia.py" is in your "PATH" environment variable or i...1299 days ago
Comment on "KAT: a K-mer analysis toolkit to quality control NGS datasets and genome assemblies"
Using KAT again (You will need the modules: KAT/2.1.1 and gnuplot/4.6.5) – we can plot the kmer content of the assembly compared to the kmer content of...1351 days ago
Comment on "REAPR: a universal tool for genome assembly evaluation"
Reapr is a tool trying to find explicit errors in the assembly based on incongruently mapped reads. It is heavily based on too low span coverage, or reads mapping too...1351 days ago
Comment on "Setting up autoConTAMPR !"
Setting up mafft (7.123-1) ...Setting up maq (0.7.1-5) ...Setting up muscle (1:3.8.31-1) ...Setting up perl-doc (5.18.2-2ubuntu1.7) ...Setting up perl-tk (1:804.031-1build1...1456 days ago
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
Molecular informatics journal is also a good alternative for bioinformatics tools publication https://onlinelibrary.wiley.com/toc/18681751/2020/39/41475 days ago
Comment on "China’s BGI says it can sequence a genome for just $100"
good news after long time. Illumina monoploy will end soon.1541 days ago
Comment on "List of Bioinformatics Vacancy, Jobs, Opportunity websites"
Researchgate is also a good website for that https://www.researchgate.net/jobs/search/bioinformatics1858 days ago
Comment on "Python and BioPython Tutorial"
Jadu Saikia blog on python is a good resorce for beginners http://pythonstarter.blogspot.in/3261 days ago
Comment on "R and Bioconductor Tutorial"
This tutorial is good for beginners http://evolution.unibas.ch/teaching/evol_genetics/1_Bioinformatics/lecture_notes/HS2013_9_R.pdf3543 days ago
Comment on "Which of the following programming language is best for a bioinformatics beginner?"
I agree with Jitendra, choosing programming platform is more personal and also depend on how long you are working with your favourite language. But for beginners, I would r...3545 days ago