Comment on "Sibelia: A comparative genomics tool"
Basic usage =========== In this manual it is assumed that "Sibelia" is properly installed and the directory with "Sibelia.py" is in your "PATH" environment variable or i...1287 days ago
Comment on "KAT: a K-mer analysis toolkit to quality control NGS datasets and genome assemblies"
Using KAT again (You will need the modules: KAT/2.1.1 and gnuplot/4.6.5) – we can plot the kmer content of the assembly compared to the kmer content of...1339 days ago
Comment on "REAPR: a universal tool for genome assembly evaluation"
Reapr is a tool trying to find explicit errors in the assembly based on incongruently mapped reads. It is heavily based on too low span coverage, or reads mapping too...1339 days ago
Comment on "Setting up autoConTAMPR !"
Setting up mafft (7.123-1) ...Setting up maq (0.7.1-5) ...Setting up muscle (1:3.8.31-1) ...Setting up perl-doc (5.18.2-2ubuntu1.7) ...Setting up perl-tk (1:804.031-1build1...1444 days ago
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
Molecular informatics journal is also a good alternative for bioinformatics tools publication https://onlinelibrary.wiley.com/toc/18681751/2020/39/41463 days ago
Comment on "China’s BGI says it can sequence a genome for just $100"
good news after long time. Illumina monoploy will end soon.1529 days ago
Comment on "List of Bioinformatics Vacancy, Jobs, Opportunity websites"
Researchgate is also a good website for that https://www.researchgate.net/jobs/search/bioinformatics1847 days ago
Comment on "Python and BioPython Tutorial"
Jadu Saikia blog on python is a good resorce for beginners http://pythonstarter.blogspot.in/3249 days ago
Comment on "R and Bioconductor Tutorial"
This tutorial is good for beginners http://evolution.unibas.ch/teaching/evol_genetics/1_Bioinformatics/lecture_notes/HS2013_9_R.pdf3532 days ago
Comment on "Which of the following programming language is best for a bioinformatics beginner?"
I agree with Jitendra, choosing programming platform is more personal and also depend on how long you are working with your favourite language. But for beginners, I would r...3533 days ago