Results for "in-depth"
Blogs
How to Prepare your Bioinformatics CV ?
Preparing a CV is also an art as well as a requirement for a person applying for a job . Curriculum Vitae is the first impression on the employer so it should be the bes...3385 days ago
Structural variation: the hidden genomic treasure
Genome re-sequencing projects have revealed substantial amounts of genetic variation between individuals extending beyond single nucleotide polymorphisms (SNPs) and shor...2714 days ago
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Bookmarks
- HiCdat: a fast and easy-to-use Hi-C data analysis tool HiCdat is easy-to-use and provides solutions starting from aligned reads up to in-depth analyses. Importantly, HiCdat is focusse...
3017 days ago
CovCal: Coverage / Read Count Calculator
Coverage / Read Count Calculator Calculate how much sequencing you need to hit a target depth of coverage (or vice versa). Instructions: set the read length/configurat...2178 days ago
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Pages
Genome Assembly Tools and Software - PART2 !!
The genome assemblers generally take a file of short sequence reads and a file of quality-value as the input. Since the quality-value file for the high throughput short...2697 days ago
Awesome perl frameworks, libraries and software - PART 4
...min. Alpha. SethRobertson/git-what-branch - Discover what branch a commit is on, or how it got to a named branch shabble/irssi-docs - In-depth documentation of the Irssi IR...2506 days ago
Top-level pages
List of In-silico Binding Site Prediction Tools
Following are the list of In-silico Binding Site Prediction in Proteins tools CASTp : http://sts.bioengr.uic.edu/castp/ Computed Atlas of Surface Topography of pr...3756 days ago
Commercial and public next-gen-seq (NGS) software
Integrated solutions CLCbio Genomics Workbench - de novo and reference assembly of Sanger, Roche FLX, Illumina, Helicos, and SOLiD data. Commercial next-gen-seq software...3531 days ago
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Wire posts
Opportunity posts
Postodoc in Computational/Systems Biology and Machine Learning
...disorders. You have a PhD in Computational Science, Bioinformatics, or equivalent. Especially relevant skills for the profile are: 1. In-depth understanding and implementat...3690 days ago
Opening for RA/extended SRF in Bioinformatics project by DBT at Bose Institute
...m (IGCS) for Biomolecular Modeling, Molecular Dynamics & Structures” Desired Profile : Ph.D degree in Biological or Chemical Sciences with in-depth understanding of protein stru...3365 days ago
- +6 more Opportunity posts
ResearchLabs posts
- The laboratory is focused on the discovery and analysis of structural variation (SVs) from genomic sequence data. As part of the 1000 Genomes Project and other endeavors...
3004 days ago
Video
How to sequence the human genome - Mark J. Kiel
...tists are now able to know the sequence of letters that makes up an individual genome relatively quickly and inexpensively. Mark J. Kiel takes an in-depth look at the science behind th...3640 days ago
Bio-Scripts
- # get total number of bases covered at MIN_COVERAGE_DEPTH or higher samtools mpileup mapping_result_sorted.bam | awk -v X="${MIN_COVERAGE_DEPTH}" '$4>=X' | wc -l 32876...
2221 days ago
- jitendra@jitendra-UNLOCK-INSTALL[SNP] wget https://github.com/broadinstitute/gatk/releases/download/4.0.2.1/gatk-4.0.2.1.zip --2018-08-30 11:47:20-- https://github.com...
2087 days ago
- +6 more Bio-Scripts
Tags
NucDiff: In-depth characterization and annotation of differences between two sets of DNA sequences
NucDiff locates and categorizes differences between two closely related nucleotide sequences. It is able to deal with very fragmented genomes, structural rearrangements and various local differences. These features make NucDiff to be perfectly suitable to compare assemblies with each other or wit...Tags: NucDiff, In-depth, characterization, annotation, differences, DNA, sequences
1473 days ago
Proksee: in-depth characterization and visualization of bacterial genomes
Proksee is an expert system for genome assembly, annotation and visualization. To begin using Proksee, provide a complete genome sequence, sequencing reads or a CGView/Proksee map JSON file.Tags: Proksee, in-depth, characterization, visualization, bacterial, genomes
373 days ago
Comments
- AfterQC AfterQC - Automatic Filtering, Trimming, Error Removing and Quality Control for fastq data. dupRadar dupRadar. An R package which provides...
2149 days ago
Comment on "Does anyone have Nanopore latest updates?"
92% genome coverage of E. coli, average depth of 3.8x. But from just _43_ reads https://github.com/nickloman/massive-nanopore-silliness http://lab.loman.net/2017/03/09/ultrareads-for-nanopore/2564 days ago
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