Results for "master in bioinformatics"
Bio-Scripts
➜ Tools git:(master) ✗ wget https://github.com/samtools/htslib/releases/download/1.9/...tar.bz2’ saved [1178859/1178859] ➜ Tools git:(master) ✗ tar -vxjf htslib-1.9.tar.b.../config.h.in htslib-1.9/configure ➜ Tools git:(master) ✗ cd h...2029 days ago
Installing Platypus on Ubuntu !
(py27) ➜ Tools git:(master) ✗ git clone https://github.com/andyrim...), done. (py27) ➜ Tools git:(master) ✗ cd Platypus (py27) ➜ Platypus git:(master) ls Dockerfile extensions L...tu1) ... ➜ htslib-1.9 git:(master) ✗ make install zsh: correct...s] Error 1 ➜ htslib-1.9 git:(master) ✗ sudo...2029 days ago
- http://stackoverflow.com/questions/6373277/git-sync-local-repo-with-remote-one This...your remote repo. Remember to replace origin and master with the remote and branch th...ith. git fetch origin git reset --hard origin/master git cl...
1991 days ago
- jit@jit-HP-Pro-3335-MT:~/Downloads$ git clone https://github.com/ugexe/zef.git Clonin.../raw.githubusercontent.com/ugexe/Perl6-ecosystems/master/cpan1.json ===> Updated cpan.../raw.githubusercontent.com/ugexe/Perl6-ecosystems/master/cpan1.j...
1560 days ago
Installing docker for Bioinformatics on Ubuntu !
jit@jit-HP-Pro-3335-MT:~/Downloads$ sudo apt-get remove docker docker-engine docker.io containerd runc Reading package lists... Done Building dependency tree Read...1523 days ago
Pack a perl program with their dependencies on Ubuntu !
...can find the test script web.pl at https://bioinformaticsonline.com/snippets/vi...~/Downloads/autoConTAMPR/bin$ ./web https://bioinformaticsonline.com #It return thi...a Filipów@samfil Nalesh G Jadhav@master_noddy Sanchari Sircar@Sanchari...1521 days ago
Create random 10000 SNPs in genome !
(base) ➜ dupStudy git:(master) ✗ perl ../simuG.pl -refseq SGDref.R64-2-1.dups.fa -snp_count 10000 -prefix simuSNP [Sun Jan 10 16:05:57 2021] Starting simuG .. [Sun...1220 days ago
Create random 1000 INDEL in genome !
(base) ➜ dupStudy git:(master) ✗ perl ../simuG.pl -refseq simuSNP.simseq.genome.fa -indel_count 1000 -prefix simuINDEL [Sun Jan 10 16:14:00 2021] Starting simuG .....1220 days ago
Create random 1000 CNVs in genome !
(base) ➜ dupStudy git:(master) ✗ perl ../simuG.pl -refseq simuINDEL.simseq.genome.fa -cnv_count 100 -prefix simuCNV [Sun Jan 10 16:24:20 2021] Starting simuG .. [Su...1220 days ago
Create random 5 inversions in genome !
(base) ➜ dupStudy git:(master) ✗ perl ../simuG.pl -refseq simuCNV.simseq.genome.fa -inversion_count 5 -prefix simuINV [Sun Jan 10 16:30:40 2021] Starting simuG .. [...1220 days ago
