Results for "matches"
Blogs
Tools to detect synteny blocks regions among multiple genomes
...ge. The left of a 'SyntenyView' page displays a diagram of chromosomes with blocks of conserved synteny. The right of a page shows homology matches between individual genes with...2616 days ago
BBTools for bioinformatician !
...n, insertion, or deletion (X, I, D). Exact matches when mapping small reads (e.g...se the following flags to report only perfect matches. Code: ambig=all vslow pe...can use "hdist" and "edist" flags to allow mismatches, or get a complete list of fl...2277 days ago
Basic command-line to run BLAST
..., press the q key. Parameters of interest include the -evalue (Default is 10?!?) and the -outfmt Lets filter for more statistically significant matches with a different output forma...2250 days ago
Install ImageMagick from Unix Source
...=======================================================================ImageMagick is configured as follows. Please verify that this configurationmatches your expectations. Host syst...2152 days ago
- ...and unsigned integer expressions [-Wsign-compare] for (j=0; j<matchesLeft.isize(); j++) {...and unsigned integer expressions [-Wsign-compare] for (j=0; j<matches.isize(); j++) {...
2139 days ago
List of motif discovery tools !
...volution selection. ScanProsite Search for motifs and patterns within protein sequences. ScanProsite -- detection of PROSITE signature matches and ProRule-associated functi...1999 days ago
- ...st instance (sub) or all instances (gsub) # Both return number of matches replaced localvar = "foo...localvar => "m..t m. at th. bar" # Search for a string that matches a regular expression # i...
1842 days ago
Common steps for reads mapping !
...ng reads, the reference genome needs to be indexed. This involves creating an index of the genome sequence that allows the mapper to quickly find matches to the reads. Most mappers ha...429 days ago
