Results for "mitochondrial"
Blogs
...flag (1 or 0) -- 1 if node inherits genetic code from parent mitochondrial genetic code id -- see gencode.dmp file inherited MGC flag (1 or 0) -- 1 if node inherits mitochondrial gencode from parent GenBan...1553 days ago
Finding a mimicry game for teaching on-line and mentioned general resources
...ation Genetics: https://www.radford.edu/~rsheehy/Gen_flash/popgen/ Evolution in general https://evolution.berkeley.edu/evolibrary/home.php Mitochondrial Eve: https://projects.ncsu.e...682 days ago
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- ...optimized and adapted for the creation of high-quality, detailed circular maps of organellar genomes like the plastid genome (plastome) or the mitochondrial genome (chondriome). Neverthe...
2824 days ago
MITObim - mitochondrial baiting and iterative mapping
This document contains instructions on how to use the MITObim pipeline described in Hahn et al. 2013. The full article can be found here. Kindly cite the article if y...2194 days ago
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Bio++ : C Language libraries for your biological need
...slation, replication.Several genetic codes availables: Standard and mitochondrial (vertebrates, echinoderms and...ey J-F, Bazin E, Galtier N, Glémin S. Determination of Mitochondrial Genetic Diversity in Mammals....3953 days ago
Top-level pages
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
...NGS sequence reads by counting unique k-mers Software (C) https://github.com/bioinfo-ut/GenomeTester4/ Phy-Mer Reference-independent mitochondrial haplogroup classifier from NG...2376 days ago
Mitochondrial genome assembly tools !
...eration sequencing (NGS). The mitochondrial genome is relatively small co...der is a pipeline to assemble mitochondrial genomes and annotate mitochon...des a pipeline for annotating mitochondrial genomes. It integrates multip...tool that can be employed for mitochondrial genome assembly, especially w...247 days ago
Wire posts
News
- ...part of the genome that is passed down along the maternal line and occurs in many copies per cell. The researchers then compared this ancient mitochondrial DNA with Neandertals, Denisov...
3787 days ago
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MITObim - mitochondrial baiting and iterative mapping
This document contains instructions on how to use the MITObim pipeline described in Hahn et al. 2013. The full article can be found here. Kindly cite the article if you are using MITObim in your work. The pipeline was originally developed for Illumina data, but thanks to the versat...Tags: MITObim, mitochondrial, baiting, iterative, mapping, Tools
2194 days ago
MITOS: improved de novo metazoan mitochondrial genome annotation
Allows automatic annotation of metazoan mitochondrial genomes. MITOS is a pipeline designed to compute a consistent de novo annotation of the mitogenomic sequences. The software allows for a systematic error screening, the standardisation of gene name and gene boundary designation, anticodon labe...Tags: MITOS, improved, de novo, metazoan, mitochondrial, genome, annotation
2023 days ago
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Comments
Comment on "Calling variants in non-diploid systems"
...g variants in pooled samples where the number of samples is not known. This is the exact scenario we have here: in our sample we have multiple mitochondrial (or bacterial or viral) genom...1049 days ago
