Results for "ncbi"
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Comment on "Tools to detect synteny blocks regions among multiple genomes"
...ionship or biological interest. Obtain the genome sequences: Download the genome sequences of the selected species from a public database, such as NCBI or Ensembl. Gene annotation:...415 days ago
Comment on "Basic command-line to run BLAST"
...earches can be performed against many different databases, including the NCBI GenBank, RefSeq, and non-redu...been set, the BLAST search can be run. This can be done online using the NCBI BLAST website or locally usin...415 days ago
Comment on "Basic command-line to run BLAST"
Detail tutorial here https://www.ncbi.nlm.nih.gov/books/NBK279684/613 days ago
Comment on "ncbi-datasets-cli -- Quickstart: command line tools !"
(base) [jnarayan@hn1 TOOLS]$ curl -o datasets 'https://ftp.ncbi.nlm.nih.gov/pub/datasets/command-line/LAT...-:--:-- 425k(base) [jnarayan@hn1 TOOLS]$ curl -o dataformat 'https://ftp.ncbi.nlm.nih.gov/pub/datasets/comm...872 days ago
Comment on "Download desire version of Blast software !"
Latest blast software and old versions https://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/LATEST/934 days ago
Comment on "Download desire version of Blast software !"
Blast v2.12 wget https://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/LATEST/ncbi-blast-2.12.0+-x64-linux.tar.gz934 days ago
Comment on "Download desire version of Blast software !"
Blast database version 4 @ https://ftp.ncbi.nlm.nih.gov/blast/db/v4/934 days ago
Comment on "List of non-commercial NGS genotype-calling software"
Delly – Structural variant discovery by integrated paired-end and split-read analysis. [ paper-2012 ] lumpy – lumpy: a general probabi...1134 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
halSynteny: a fast, easy-to-use conserved synteny block construction method for multiple whole-genome alignments https://pubmed.ncbi.nlm.nih.gov/32463100/1236 days ago
Comment on "Sibelia: A comparative genomics tool"
...//circos.ca 4. D3. http://d3js.org/ 5. Helicobacter pylori. http://www.ncbi.nlm.nih.gov/genome/169 6. Staphylococcus aureus. http://www.ncbi.nlm.nih.gov/genome/1541277 days ago
