Results for "plant pathogen interaction"
Blogs
Computer simulation of genetic mechanism !!
Computer simulation is the discipline of designing a model of an...lotype blocks for genome-wide interaction analysis https://sourceforge....s with pure, strict epistatic interactions with n-loci. http://sourcefo...simulated genotypes http://evoplant.uni-hohenheim.de/doku.php?id=softwa...2967 days ago
- Ancestral sequence reconstruction (ASR) – also...des, PARANA finds a parsimonious set of ancestral interaction events (edge gains and losses...support gene duplication and loss and independent interaction gain and loss. The method wor...
2522 days ago
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Bookmarks
- Plant scientists can exploit available 50 plant complete genomic data for their resequencing or other...molecular evolution. Complete information about these plant ge...https://www.crops.org/publications/tpg/articles/6/2/plantgenome...
3841 days ago
- RNA Seq Basic Galaxy Tutorial RNA-Seq tutorial based on Trapnell et al. (2012...ChIP-Seq In this protocol we discuss ChIP-Seq: a method to analyze the interaction between proteins and DNA. A...
3645 days ago
- +28 more Bookmarks
Files
India's own first drug - from Biocon.
Psoriasis is immune-mediated disease that effects the skin. the Disease on an average affects about 10-20 million I...n generally occurs, when the immune system mistakes a normal skin cell for a pathogen, a...3912 days ago
Evaluation of genome assembly software based on long reads
TGS technologies have been used to produce highly accurate de novo assemblies of hundreds of microbial genomes and highly contiguous reconstructions of many dozens of plant and a...1912 days ago
Discussion topics
- Like in case of plant genomes where nature of genome is too complex and huge in size to accomplish complete de novo assembly by current sequencing technology. What would be alternate solution? Can we live in reference free world?
3937 days ago
Pages
Bioinformatics in Africa: Part2 - Kenya
... insect ecology and plant pathogen interactions though studies&...and proteomics (including key tropical pathogens) 4. Structural bioinformatics 5...Immunoinformatics 11. Hostpathogen interaction 12. High performance computin...1176 days ago
Bioinformatics in Africa: Part3 - Mali
International Center for Excellence in Research (ICER):...1. Functional genomics 2. Analysis of microarray data 3. Interaction between the ve...1176 days ago
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Top-level pages
- "Bioinformatics is a science of biological predictions and...ntific articles, notably on protein–protein interactions. Analysing sequence data:...or subfamilies; predicting protein–protein interactions; analysing single nucleotid...
3939 days ago
Best book Titles for Learning Bionformatics
Nothing can add to our intellect more than reading a boo...Gibson, Spencer V. Muse, 2002, Sinauer Associates Pathogen Genomics: Impact on Human Hea...olouri (Editors), 2001, MIT Press Protein-Protein Interactions: A Molecular Cloning Manual,...3910 days ago
- +13 more Top-level pages
Wire posts
News
100K Foodborne Pathogen Genome Project
The 100K Genome Project, led by the University of California, Davis, the U.S. Food and Drug Administration’s Center for Food Safety and Applied Nutrition, and Agile...3915 days ago
Barber pole worm , sheep pathogen sequenced !!!
Haemonchus contortus is a highly pathogenic parasitic nematode of that can infect a large number of wild an...edburner&utm_medium=feed&utm_campaign=Feed%3A+sciencedaily%2Fplants_animals+(ScienceDaily%3A+Plants+%26+...3889 days ago
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Opportunity posts
- van Noort Group is looking for PhD fellows...rties, subcellular localization and interaction. These technologies produce l...y to facilitate unravelling complex interactions between alleles, for example...methods, machine learning, protein interaction databases, perl/python script...
3941 days ago
Postdoctoral position in bioinformatics @ Sweden
Information about the department The Department of Mathematical Sciences at Chalmers...in programming (e.g. Python/Java/C) and comfortable with Unix/Linux systems. Interaction with experimental biologists...3940 days ago
- +82 more Opportunity posts
ResearchLabs posts
- The Computational Biology research group was established in October 2012 at the Depar...nformatics (MPII) and the Cluster of Excellence for Multimodel Computing and Interaction (MMCI) at Saarland University...
3902 days ago
- Complex networks and network mining: developing graph theoretic, mathematical, and co...logical function, disease, and evolution in molecular (e.g., protein-protein interaction) networks. Computational c...
3893 days ago
- +9 more ResearchLabs posts
Video
Genome + Epigenome = New Understanding of the Pathogens in Your Food
UC Davis's Bart Weimer describes foodborne pathogens and their proclivity for rapid genome rearrangement. The 100K Pathogen Ge...3865 days ago
Pimp your brain: Bioinformatics
Jan Lisec from the Max Planck Institute of Molecular Plant Physiology explains, in this "pimp your brain" epis...serial "Pimp your brain" scientists from the Max Planck Institute of Molecular Plant Physi...3537 days ago
Bio-Scripts
Download the genome from NCBI using bash script/command
#!/bin/bash # Download the genome from NCBI using command # Create a Directory mkdir...2/\2_genomic.fna.gz|' > genomic_file_bacteria # -for plant curl 'ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/plant/assem...2524 days ago
Download the gff files from NCBI using bash script/command
#!/bin/bash # Download the genome from NCBI using command # Create a Directory mkdir...2/\2_genomic.gff.gz|' > genomic_file_bacteria # -for plant curl 'ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/plant/assem...2515 days ago
- +2 more Bio-Scripts
Tryst
Tryst with a Bioinformatician # Dr Altan Kara
Dr Altan Kara is a Bioinformatics specialist at th...so far in my scientific career was predicting the interaction between the prokaryotic two-c...nt proteins. To be able to accurately predict the interactions between these proteins, I cr...2354 days ago
