Results for "prokaryotic"
Blogs
Dynamic chromosome breakpoints !!!
...o; refers to these places where they break. Mostly, this process occurs with a high degree of accuracy at high frequency in both eukaryotic and prokaryotic cells. But occasionally this...3553 days ago
List of motif discovery tools !
...lation site database Search for phosphorylation data of any protein of interest. PHOSPHORYLATION SITE DATABASE Search for information on prokaryotic proteins that undergo serine,...1994 days ago
- +1 more Blogs
Bookmarks
- ...nbsp;Support Vector Machine (SVM) that combines 6 individual sequence based protein-protein interaction prediction methods to predict prokaryotic two-component system pro...
2621 days ago
- MAKER is a portable and easily configurable genome annotation pipeline.Its purpose is to allow smaller eukaryotic and prokaryotic genome projects to independently annotate their genomes...
3010 days ago
- +18 more Bookmarks
Pages
Awesome perl frameworks, libraries and software - PART 4
...or John Gruber’s Title Case program yko/mojo.vim - Vim syntax for mojo epl templates in Mojo projects tseemann/prokka - Rapid prokaryotic genome annotation peterkeen/...2495 days ago
Top-level pages
Genome Assembly Tools and Software - PART1 !!
...next-generation sequencing data. CAR – Contig Assembly of Prokaryotic Draft Genomes Using Rearrange...R is an efficient and more accurate tool for assembling contigs of a prokaryotic draft genome based on a refer...2686 days ago
Tools for bacterial whole genome annotation
...s)… which is in-built in RAST. NCBI Prokaryotic Genome Annotation Pipeline is...nts. PGAP: NCBI has developed an automatic prokaryotic genome annotation pipeline th...peline. MAKER allows smaller eukaryotic and prokaryotic genome projects to independen...2332 days ago
Wire posts
News
Curated set of ribosomal RNA (rRNA) reference sequences (targeted loci) with verifiable organism
...ce sequences (targeted loci) with verifiable organism sources and current names. This set is critical for correctly identifying and classifying prokaryotic (bacteria and archaea) and fu...1534 days ago
Cleaner BLAST Databases for More Accurate Results
...r sequences using the genome cross-species aligner (GX) Average Nucleotide Identity (ANI) evaluates the taxonomic classification of prokaryotic genome assemblies. Sequences...13 days ago
Opportunity posts
Project Fellow Bioinformatics at Central University of Himachal Pradesh
...Project Fellow Bioinformatics Job in Central University of Himachal Pradesh Project (MRP) entitled: “A project proposal on targeting novel prokaryotic ubiquitin like post-translati...3009 days ago
ResearchLabs posts
- Work include (i) understanding the evolutionary relationships among different prokaryotic and eukaryotic organisms; (ii) Understanding the cellular functions of these lineage-specific s...
1954 days ago
Video
- Paul Andersen takes you on a tour of the cell. He starts by explaining the difference between prokaryotic and eukaryotic cells. He also explains why cells are small but not infinitely...
3890 days ago
Tryst
Tryst with a Bioinformatician # Dr Altan Kara
...r the development of a computational method to design inhibitors for prokaryotic two-component systems. In thi...r in my scientific career was predicting the interaction between the prokaryotic two-component proteins. To be...2363 days ago
Tags
Calling variants in non-diploid systems
The main challenge associated with non-diploid variant calling is the difficulty in distinguishing between the sequencing noise (abundant in all NGS platforms) and true low frequency variants. Some of the early attempts to do this well have been accomplished on human mitochondrial DNA a...Tags: Variant, Prokaryotic, virus, genome, snp, tutorial, galaxy
1044 days ago
DFAST: a flexible prokaryotic genome annotation pipeline for faster genome publication
We developed a prokaryotic genome annotation pipeline, DFAST, that also supports genome submission to public sequence databases. DFAST was originally started as an on-line annotation server, and to date, over 7,000 jobs have been processed since its first launch in 2016. Here, we present a newly ...Tags: DFAST, flexible, prokaryotic, genome, annotation, pipeline, faster, genome, publication
2364 days ago
- +2 more Tags
