22 days ago
Computer simulation of genetic mechanism !!
...E is a C++ program that simulates sequence-like data over large genomic regions in large diploid populations...imulator HAP-SAMPLE An association simulator for candidate regions or genome scans http://www.h...2987 days ago
Various scholarships around the world !!
This page provides information on scholarships for developing countries students who are in need of scholarship to study at home and abroad. A scholarsh...2829 days ago
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3573 days ago
Bioinformatics Courses Around the World
...ce analysis, a course on gene finding, a course on analysis of promoter region,... master: bioinformati...ional Bioinformatics Institute introduction to bioinformatics Regional training course on bioinfor...3955 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
...imulates sequence-like data over large genomic regions in large diploid populations...-SAMPLE An association simulator for candidate regions or genome scans http://www.h...n of DNA polymorphism data for a recom- bining region within which a single bi-alle...3749 days ago
Conserved Domain Database (CDD) version 3.11 released
...sed scoring. This abolishes the need to mask out compositionally biased regions in query sequences; Dom...“concise” and “full” results. “Standard” results will provide, for each region on the query sequence, the be...3739 days ago
Curated set of ribosomal RNA (rRNA) reference sequences (targeted loci) with verifiable organism
...ngi type and reference material *Internal transcribed spacer region (ITS) from Fungi type and ref...1545 days ago
PostDocs positions in computer science in HELSINKI, FINLAND
Several university departments in the Helsinki region, Finland, are looking for postdoctoral researchers in...computing, Human-centric ubiquitous ICT, Bioinformatics, etc. Helsinki region is a safe, pleasant and attra...3906 days ago
Internships @ Indian Institute of Science
...ch node will host student interns interested in pursuing a research career in mathematical or computational biology at institutions located in its region. Eligibility: Bachelors (3...3757 days ago
3396 days ago
Python script to download covid genome !
...= seqs['genbank-sequences'] print("got %d sequences" % len(seqs)) from Bio import Entrez allseq = {} for x in seqs: if 'gene-region' in x and x['gene-region'] == "complete": nm = x[...1148 days ago
Create genome scaffolding with Perl
...affold_", # prefix for contig names "pid" => 90, # percent ID threshold "trimlimit" => 50, # max number of overlapping bases outside match region }; GetOptions($projOpts...2320 days ago
1532 days ago
Comment on "LAMSA: fast split read alignment with long approximate matches"
...m1 -M1 -O1,1,1,1 -E1,1,1,1 -w100 -b0 -e0.25 -d0.10 Output options: -r --max-out [INT] Maximum number of output records for a specific split read region. [10] -g --gap-split [INT] Mi...2135 days ago