Five points for bioinformatics software/tools
In the bioinformatics sector we mostly spend time on computational analysis of huge amounts of data and try to make...an’t be validated. Moreover, there is very less chances that anyone will repeat...3717 days ago
Tools to detect synteny blocks regions among multiple genomes
The synteny block (which etymologically means “on the same ribbon”) is a...el-Insights-into-Chromosome-Evolution-in-Birds , http://science.sciencemag.org/content/346/6215/1311). But the puzz...2620 days ago
Best practices in bioinformatics training for life scientists
Among life scientists, from clinicians to environmental researchers, a common theme i...nd practical concepts. Find the detail paper at http://bib.oxfordjournals.org/content/early/2013/06/25/bib.bbt043.f...3927 days ago
Next Generation Sequencing (NGS) Tutorials
Institute of computational biomedicine, Cornell Universit...neration sequencing http://hmg.oxfordjournals.org/content/19/R2/R227.full.pdf ========...data http://bioinformatics.oxfordjournals.org/cgi/content/abstract/28/2/284?etoc RseqF...3497 days ago
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Want to Know which genome assembler rule the world ?
Assemblathon 2: evaluating de novo methods of genome assembly http://www.gigasciencejournal.com/content/2/1/10/abstract http://blogs...3929 days ago
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Genome Assembly Tools and Software - PART2 !!
The genome assemblers generally take a file of short sequence read...Sequence AssemblerRePS (Repeat-masked Phrap with scaffolding...licitly identifies exact kmer repeats from the shotgun data and re...sembly reduces the numbers of repeats in the assembly, allows more...2695 days ago
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Phylogenetic for Bioinformatics
Biologists estimate that there are about 5 to 100 million...a phylogenetic tree: http://www.hiv.lanl.gov/content/sequence/TUTORIALS/TREE_TUTOR...torial.htmlPhylogenetic Trees: http://cnx.org/content/m11052/latest/Phylogeny by Ro...3956 days ago
3962 days ago
2.4 Mb Genome Size for World's Biggest Virus
The genome size of new discovered Pandoraviruses have roughly twice the size of the r...t it may come from a different origin. For detail : http://www.sciencemag.org/content/341/6143/281 http://www.npr....3932 days ago
PostDocs positions in computer science in HELSINKI, FINLAND
Several university departments in the Helsinki region, Finland, are looking for postd...ata Communications Software group) Intelligent multimodal information access (Content-Based Image and Information R...3903 days ago
NIT Calicut Faculty Jobs 2013 in Bioinformatics
NATIONAL INSTITUTE OF TECHNOLOGY CALICUT, KERALA NOTIFICATION FOR FACULTY RECRUITM...ture recommended by MHRD. More Info : http://www.nitc.ac.in/index.php/?url=content/submenu/2345/53855 days ago
Bioinformatics -- Understanding of living systems through information science
Recently, the progress of the Human Genome Project, aiming to decode all human DNA se...ganisms, to see where it's the same and where it's different. In that way, the content of the genome is decoded bit...3926 days ago
3711 days ago
Count GC Content in nucleotide sequence with Perl
#!/usr/bin/perl -w ### Usage: get_gc_content.pl...----------------------- print OUT "ID\t% GCContent\tTotal Count\tG Count\tC Coun...; close(OUT); sub usage { $0 get_gc_content.pl } sub process_it...2915 days ago
Fill up the form and blast with perl
use WWW::Mechanize; use strict; use warnings; my $mech = WWW::Mechanize->new; m...etSet' => 'ATH1_pep', 'QueryText' => $sequence, }, ); print $mech->content;2335 days ago
Single molecule Sequencing (SMS)
SMS is now slowly gaining place in sequencing world, more and more scientists now kee...for instance, http://www.genomebiology.com/2013/14/7/405 http://biorxiv.org/content/early/2015/06/29/021634...3237 days ago