How to install Perl modules manually, using CPAN command, and other quick ways
...p; | 2.4 MB 00:00Setting up Install ProcessParsing pac...f commit” in the cpan prompt after the configuration to save the settings.# cpanSorry, we have to reru...3961 days ago
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HOMER: Software for motif discovery and next-gen sequencing analysis
...dently of HOMER, and represents knowledge which is important to know before diving head first into more advanced analysis tools such as HOMER. Setting up your computing environment...2942 days ago
Bio++ : C Language libraries for your biological need
...meant to encourage and support the development of large programs. Perhaps most importantly, it supports object-oriented programming in a familiar setting and framework (that of C). Wh...3958 days ago
Linux SSH Client Commands for Bioinformatics
...t: Metaconfig parsing stopped at line 3. debug: SshConfig/sshconfig.c:637/ssh_config_set_param_verbose: Setting variable 'VerboseMode' to 'FA...3716 days ago
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Ebola virus disease (EVD)or Ebola haemorrhagic fever !!!
...s:Avoid contacting infected blood or secretions, including from those who are dead .Using standard precautions for all patients in the healthcare setting.Sterilizing equipment, and we...3566 days ago
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Converting from Windows-style to UNIX-style line endings with dos2unix
...... 177704 files and directories currently installed.) Preparing to unpack .../dos2unix_7.3.4-3_amd64.deb ... Unpacking dos2unix (7.3.4-3) ... Setting up dos2unix (7.3.4-3) ... Pr...1187 days ago
Install ATOM editor on Elemantory OS / Ubuntu
...-4ubuntu1_amd64.deb ... Unpacking gconf-service (3.2.6-4ubuntu1) ... Setting up gconf2-common (3.2.6-4ubuntu1) ... Creating config file /etc/gconf/2/path with new version Setting up libgconf-2-4:amd64 (3.2.6-...1186 days ago
Tryst with a Bioinformatician # Dr Altan Kara
...Research Center. His research interest revolves around the cancer informatics and computational aided-drug design. I applaud Dr Altan for clearly setting out both his expectations of...2373 days ago
LINKS scaffolder bloomfilter setting !
➜ bin git:(master) ✗ ls -l total 68 drwxrwxr-x 3 urbe urbe 4096 Jun 15 12:15 lib -rwxrwxrwx 1 urbe urbe 65141 Jun 15 17:13 LINKS ➜ bin git:(master) ✗ pwd /home/urbe/Tools/LINKS_1.8.6/bin ➜ bloomfilter git:(master) ✗ swig -Wall -c++ -perl5 BloomFilter.i ➜ bloomfilter git:(master) ✗...Tags: LINKS, scaffolder, genome, Perl, Perl_Gthr_key_ptr, setting, anaconda
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Setting python version as default on Linux
If you have a later version than 2.6 you'll need to set 2.6 as the default Python. Later versions would be 2.7 and 3.1; see what you have by typing python -V at the terminal. For purposes of this example we'll assume you have 3.1 installed. You'll next need to execute the following commands: ...Tags: Python, Version, Setting, Ubuntu, Linux
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Comment on "Sibelia: A comparative genomics tool"
...efault directory = "." You can change this by setting cmd parameter: -o <dir...es output files in current working directory. Setting this parameter will change o...e last stage. You can override this value by setting the "--lastk" parameter:...1295 days ago
Comment on "Mugsy: multiple whole genome alignment tool"
...genome1.fasta genome2.fasta genome3.fasta This example will align three genomes and output a file /data/output/mygenomes.maf. The --directory setting is also used for storing temp...1296 days ago