Understanding reads mapping and flags !
Linear Alignment: An alignment of a read to a single reference sequence that may include insertions, deletions, skips and clipping, but may not include d...1838 days ago
1837 days ago
Exchange Programme for Indian scientist !!
The Indian National Science Academy (INSA) is a premier scientific learned body (established in 1935) representing all branches of science –Physica...1601 days ago
1549 days ago
Software for genome assembly !
List of bioinformatics tools/Software Website References for genome assembly: 1 Falcon https://github.com/PacificBiosciences/pb-assembly 2 Canu assembler http://canu.readthedocs...1345 days ago
10 NGS services companies around the globe !
The global NGS services market is expected to reach USD 13.1 bil...on systems. The company’s genome services are suitable for cus...eration sequencing services including genomes, targeted (re)-sequencing, h...n India. Popular mentions – MedGenome...1261 days ago
Bioinformatics tools for telomere to telomere assembly !
● Merfin – k-mer-based assembly and variant calling...; algorithm that leverages a pangenome reference built from haplotype-resolved genome assemblies in conjunction wit...riptome data (Richard Kuo @GenomeRIK)● pbaa (PacBio A...long transcriptomic reads to a genome,...993 days ago
Protocol for De novo Genome Assembly using Illumina Reads
In this protocol, we address and descr...hod for small to medium-sized genomes. What is de novo genome assembly?The method of taking...ew/42542/trimmomatic-command Genome Assembly:The object of this p...nts between genomes from read mappings. Genome finishing tools:Semi-automated...1206 days ago
Common Bioinformatics Interview Questions !
The possibility of an interview for a bioinformatics position in the life sciences may be very disquieting, but the same concerns emerge time and again in my experience...1199 days ago
Ancient whole genome duplication (WGD) detection tools !
There are two methods for ancient WGD detection, one is collinearity analysis, and the other is based o.../miniconda3/envs/wgd/make -j 4 make insatall Take the sugarcane genome Saccharum spontaneum L as an example. The genome...1156 days ago