Software and Tools to detect structure variation with long reads !!
Uncovering the connection between genetics and heritable diseases requires an approach that looks at all the varia...Unified variant calling user interface with built-in cluster compute support Small i...2607 days ago
Bioinformatics tools developed for Oxford Nanopore data analysis !
MinION is the only portable real-time device for DNA and RNA sequencing. Each consumable flow cell can now generate 10–20 Gb of DNA sequence data....2320 days ago
BBTools for bioinformatician !
...X, I, D). Exact matches when mapping small reads (e.g. miRNA) When mapping small RNA's with BBMap use the foll...distribution. It could also be used for RNA-seq when using a transcriptome...a large dataset with partition.sh into smaller subsets (example below splits...2270 days ago
Basic command-line to run BLAST
The goal of this tutorial is to run you through a demonstration o.... This is a bit too big, lets take a smaller set for practice. Lets take...head -6 cow.1.protein.faa > cow.small.faa BLAST Now we...n comparisons. blastp -query cow.small.f...2244 days ago
2133 days ago
Julia Programming Language, a Python and R rival
Big data has grown to become one of the most lucrative fields. In fact, data scientists...that Julia is a new programming language, it has a small community as compared to othe...n use to handle Big data projects. Despite having a small c...2080 days ago
List of motif discovery tools !
In genetics, a sequence motif is a nucleotide or amino-acid sequence pattern that is...conformation generator Produce 3D conformations of small drug compounds. HGPD --...ces such as cis-elements in nucleotide sequences or small d...1993 days ago
Understanding reads mapping and flags !
Linear Alignment: An alignment of a read to a single reference sequence that ma...ion in DNA-seq and it may indicate the presence of chimeric genes in RNA-seq. In short, chimeric reads ca...1837 days ago
10 NGS services companies around the globe !
The global NGS services market is expected to reach USD 13.1 billion by 2025. Here are the top 10 NGS services companies to look for – 1.&nbs...1259 days ago
Bioinformatics tools for telomere to telomere assembly !
● Merfin – k-mer-based assembly and variant calling evaluation for improved consensus accuracy (Arang Rhie)● PanGenie – algorithm that l...991 days ago