SeQuiLa-cov: A fast and scalable library for depth of coverage calculations
...ect home page: http://biodatageeks.org/sequila/ • Source code repository: https://github.com/ZSI-Bio/bdg-sequila • Operating system: Platform independent •...1597 days ago
CLARK: Fast, accurate and versatile sequence classification system
CLARK, a method based on a supervised sequence classification using discriminative k-mers. Considering two distinct specific classification problems (see the artic...1535 days ago
Dahak: benchmarking and containerization of tools for analysis of complex non-clinical metagenomes.
...al classification, genome binning, and gene assignment. We aim to deliver the analytical framework as a robust and reliable containerized workflow system, which will be free from depe...1481 days ago
Supernova: generates phased, whole-genome de novo assemblies from a Chromium-prepared library.
...whole-genome de novo assemblies from a Chromium-prepared library. Please see Achieving Success with De Novo Assembly and System Requirements before ...1429 days ago
Ktrim: an extra-fast and accurate adapter- and quality-trimmer for sequencing data
...;g++ v4.8.5 and linked with libz v1.2.7 for Linux x86_64 system. If you could not run it (whi...sp;libz library) or you want to build a version optimized for your system, you can re-compile the progr...1173 days ago
954 days ago
Understanding pango networks !
...esignation Committee. https://www.pango.network/the-pango-nomenclature-system/statement-of-nomenclature-rules/ https://www.pango.network/how-does-the-system-work/what-are-pango-lineages/...926 days ago
867 days ago
oGNM:Conformational dynamics based on contact topology in a coarse-grained presentation
...ber of the orthogonal normal modes are the same as those in unperturbed systems (in the absence of the envir...entations to be more efficient (saving 3/4 time, assuming equal size of system and environment), more memory...833 days ago
GenomeTools: The versatile open source genome analysis software
The GenomeTools genome analysis system is a free collection of bioinformatics tools (in the realm of genome informatics) combined into a single binary na...817 days ago