3946 days ago
List of bioinformatics open source projects/software.
...cs Learning Tutorial (BLT) http://sourceforge.net/projects/biotutorial/ Educational interactive tutorials and 3D animations for Replication, Transcription, and Translation BioHaskell...3756 days ago
Next generation sequencing in R or bioconductor environment
...es for a shared motif that may function as transcription factor binding site. The algo...The algorithm was developed for detecting transcription factor (TF) binding sites in...data in order to identify regions bound by transcription factors. PICS identifies enri...3624 days ago
Commercial and public next-gen-seq (NGS) software
...C/Perl. QuEST - Quantitative Enrichment of Sequence Tags. Sidow and Myers Labs at Stanford. From the 2008 publication Genome-wide analysis of transcription factor binding sites based on...3518 days ago
3495 days ago
Software packages for next gen sequence analysis
.../Perl. * QuEST - Quantitative Enrichment of Sequence Tags. Sidow and Myers Labs at Stanford. From the 2008 publication Genome-wide analysis of transcription factor binding sites based on...3242 days ago
Tools for Searching Repeats And Palindromic Sequences
...speed computers, other groups of scientists link palindrome formation to the conservation of genetic information. Related to the direction of transcription by RNA polymerase, DNA strand...2210 days ago
Genome Assembly Tools and Software - PART1 !!
...e data into many individual de Bruijn graphs, each representing the transcriptional complexity at at a given ge...idly evolving viral populations, such as HIV-1. TruHmm – TRanscription Unit Assembly by a Hidden Mar...2685 days ago
Awesome perl frameworks, libraries and software - PART 1
...iterative speech recognition and text alignment scheme that allows for the processing of very long (and possibly noisy) audio and is robust to transcription errors. It is mainly written...2488 days ago