BOL

Bioinformatics job at Naotia University https://drive.google.com/file/d/0B0Y1Fpxmzyd3OHQ3aUNYa3hZY2c/view?pref=2&pli=1 #Job #Neotia #Professor

http://animaldiversity.org/accounts/Rotifera/ #Rotifer #Introduction #Animal

Create custom widget area in wordpress. https://phpajaxhtml.blogspot.in/2018/04/create-custom-widget-in-wordpress.html

Bioinformatics tutorial https://jasonjwilliamsny.github.io/wrangling-genomics/01-automating_a_workflow.html #Workflow #Tutorial #BAM #SAM #SNP

Remove the sequence by fasta ids. awk 'BEGIN{while((getline<"ids.txt")>0)l[">"$1]=1}/^>/{f=!l[$1]}f' seq.fa #Remove #Delete #ids #fasta

Extract fasta with Ids. $ perl -ne 'if(/^>(\S+)/){$c=grep{/^$1$/}qw(id1 id2)}print if $c' fasta.file #extract #fasta #sequence #ids

https://www.ncbi.nlm.nih.gov/Class/NAWBIS/Modules/Phylogenetics/phylo12.html #P-distance #Distance #Calculation #Sequences #Align

Parameters for accurate genome alignment https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2829014/ #Alignment #Genome

Training for #North-East students only http://www.biotechpark.org.in/downloads/NorthEaststudentstrainingflyer.pdf #BioTechPark #Lucknow

#Bioinformatics #scripts links http://enve-omics.ce.gatech.edu/enveomics/docs

#Split #multifasta $ cat hg18.fa | awk '{ if (substr($0, 1, 1)==">") {filename=(substr($0,2) ".fa")} print $0 > filename }'

Convert lowercase letter to N:$ sed -e '/^>/! s/[[:lower:]]/N/g' in.fasta > out.fasta #Convert #Lowercase #Fasta #N

http://www.nactem.ac.uk/GENIA/tagger/ #biomedical #text #mining #tagger