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The Wire
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Abhimanyu Singh
@abhimanyu
Thread
1 like
Poonam Mahapatra
@poonam
Poonam Mahapatra
liked this
3505 days ago
By
Abhimanyu Singh
3524 days ago
Assembly tutorial
https:/
/
insidedna.me/
tutorials/
view/
benchmark-seven-popular-genome-assemblers
Abhimanyu Singh
@abhimanyu
Thread
1 like
Poonam Mahapatra
@poonam
Poonam Mahapatra
liked this
3505 days ago
By
Abhimanyu Singh
3524 days ago
Leading edge analysis reports
#Tags
to indicate the percentage of
#genes
contributing to the
#enrichment
score,
http:/
/
www.r-bloggers.com/
leading-edge-analysis/
#R
Neel
@neelam
Thread
By
Neel
3525 days ago
You can also try perl -MXML::Simple -e 1
Archana Malhotra
@archana
Thread
By
Archana Malhotra
3525 days ago
To
#check
if a
#module
#installed
or not try perldoc -l XML::Simple
Archana Malhotra
@archana
Thread
By
Archana Malhotra
3525 days ago
You can also try this on Ubuntu sudo perl -MCPAN -e 'upgrade'
Neel
@neelam
Thread
1 like
Archana Malhotra
@archana
Archana Malhotra
liked this
3525 days ago
By
Neel
3525 days ago
#Upgrade
the
#perl
in
#Ubuntu
$ sudo cpan cpan[1]> upgrade
Jit
@jit.aber
Thread
By
Jit
3527 days ago
Plot the coverage in R
http:/
/
cnr.lwlss.net/
SeqCoverage/
#BAM
#SAM
#R
#NGS
#Plot
Jit
@jit.aber
Thread
By
Jit
3531 days ago
The ggbio R plots
http:/
/
www.tengfei.name/
ggbio/
docs/
man/
autoplot-method.html
#Plot
#R
#Package
#ggbio
Poonam Mahapatra
@poonam
Thread
By
Poonam Mahapatra
3532 days ago
#Hierarchical
cluster analysis
http:/
/
www.econ.upf.edu/
~michael/
stanford/
maeb7.pdf
Jit
@jit.aber
Thread
By
Jit
3533 days ago
To know about your OS: lsb_release -ra
#Trick
#OS
#Linux
Jit
@jit.aber
Thread
By
Jit
3535 days ago
#genoPlotR
- plot
#gene
and
#genome
#maps
project!
http:/
/
genoplotr.r-forge.r-project.org/
Jit
@jit.aber
Thread
By
Jit
3537 days ago
Install terminal on right click on Ubuntu: sudo apt-get install nautilus-open-terminal ; nautilus -q ;
#Ubuntu
#Linux
#Terminal
#Open
Archana Malhotra
@archana
Thread
By
Archana Malhotra
3538 days ago
Bioinformatics
#scientist
openings at
#THSTI
, India
http:/
/
thsti.res.in/
down_file.php?file=146770901039THS-RN-21-2016.pdf
Jit
@jit.aber
Thread
By
Jit
3539 days ago
#GATK
and
#Picard
to filter low quality variants
https:/
/
insidedna.me/
tutorials/
view/
gatk-picard-filter-vcf-variants-snp
Jit
@jit.aber
Thread
By
Jit
3545 days ago
De
#Bruijn
#Graph
#assembly
http:/
/
www.cs.jhu.edu/
~langmea/
resources/
lecture_notes/
assembly_dbg.pdf
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