Five unique traits of effective computational biologist
Bioinformatics research is driven by large set of software, scripts, and tools to analyse...bbit hole and possibly never getting a solution. Learn to perform root cause analysis, learn enough about the under...3941 days ago
Five points for bioinformatics software/tools
In the bioinformatics sector we mostly spend time on computational analysis of huge amounts of data and t...UI software for computational analysis? Should I use commercial bioi...to accomplice your biological analysis work. This means that if you...3698 days ago
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Rdatamining.com : R and Data Mining
This website presents examples, documents and resources on data mining with R. Documents...or Data Mining, R and Data Mining: Examples and Case Studies and Time Series Analysis and Mining with R.3906 days ago
Master Thesis: Trans-membrane topology prediction through Markov based decoders
Abstract: Background/Motivation: The dearth of structural information on alpha helical membrane protein (MPs) has hi...xisting methods. Source Code: Matlab Conclusion/Implementation: Here discrimi...3935 days ago
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Does anyone have Nanopore latest updates?
There was a lot of buzz about Oxford Nanopore Technologies® is developing the Gr...sed MinION™ device. These are a new generation of electronic molecular analysis system for use in scientific...3804 days ago
Want to Know which genome assembler rule the world ?
Assemblathon 2: evaluating de novo methods of genome assembly http://www.gigascien...s-soul-searching.html http://assemblathon.org/post/44431915644/feedback-and-analysis-of-the-assemblathon-2-p &nbs...3910 days ago
Bio++ : C Language libraries for your biological need
C has always been a language that never attempts...Bioinformatics, including sequence analysis,phylogenetics, molecular evol...e libraries are as follows:Sequence analysis Sequence and Site objects, w...a set of C++ libraries for sequence analysis, phylogenetics, molecular evo...3938 days ago
BioRuby :Ruby packages for biologist
BioRuby is a package of Open Source Ruby code, with classes for DNA and protein sequence analysis, alignment, database parsing,...3938 days ago
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Structural polymorphism analysis from NGS data
The LabEx BASC (Biodiversity, Agroecosystems, Society, Climate...to analyze Next Generation Sequencing (NGS) data analysis. In the context of a flagship...omputational facilities and expertise in NGS data analysis, and will benefit as well fro...3939 days ago
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Computational Biology in the 21st Century: Making Sense out of Massive Data
Computational Biology in the 21st Century: Making Sense out of Massive Data Air...will soon outstrip advances in computing power to perform current methods of analysis. Extracting new science from...3893 days ago
Bioinformatics -- Understanding of living systems through information science
Recently, the progress of the Human Genome Project, aiming to...tion strain Bacillus subtilis. Until now, genome analysis could only be done in nationa...-generation sequencer development has made genome analysis possible in an ordinary lab....3907 days ago
Blast result parser with Perl and Bioperl
#!/usr/local/bin/perl # # Dr. Xiaodong Bai # It may be freely distributed under GNU...ted and ready for import into a spreadsheet program for browsing and further analysis. # use strict; use warni...2905 days ago
Perl script to run SATSUMA in loop !
#!/usr/bin/perl -w use strict; use File::Temp qw(tempfile); # Usage perl 1by1.pl for SATSUMA analysis # User need to set the ref...2131 days ago
Which of the following programming language is best for a bioinformatics beginner?
I will be doing NGS in the course of my research work and I will like to learn a programm...asically want to do de-novo assembly, map reads, align reads, and expression analysis. Recommendations welcomed. Wh...3521 days ago
Which math/statistics programming language/application do you most frequently use in bioinformatics?
I'm doing a bit more statistical analysis on some bioinformatics things lately, and I'm curious if there are any programming languages that are particularly good for this NGS computation. What suggestions do you guys have? Are there any languages that have exceptionally good libraries?3517 days ago
Tryst with a Bioinformatician # Dr Altan Kara
Dr Altan Kara is a Bioinformatics specialist at the fa...d genome, transcriptome, proteome, and metabolome analysis to reveal the molecular profi...t provides lots of useful tools for comprehensive analysis and comparison of high-throug...2353 days ago
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Next Generation Sequencing (NGS)
This group meant to discuss different sequencing methods and their data analysis. Now, sequencing is almost one of...3898 days ago
Master Thesis: Trans-membrane topology prediction through Markov based decoders
Abstract: Background/Motivation: The dearth of structural information on alpha helical membrane protein (MPs) has hindered thus far the development of reliable knowledge –based potentials that can be used for automatic prediction of trans-membrane (TM) protein structure. While algorithm ...Tags: transmembrane, protein, hidden markov model, viterbi, posterior decoding, classifier, Matlab, Machine Learning, Decoder, Discriminant analysis
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Comment on "Which are the best statistical programming languages to study for a bioinformatician?"
...s TYPE OF STATISTICAL ANALYSIS R MATLAB...sp; Discriminant Analysis Yes Ye...tor & Principal Components Analysis Yes Ye... Cluster Analysis Yes Ye...3542 days ago