Results for "Gene"
Users
Interests: Exploring Gene Networks3908 days ago
- About me: Research Scholar at Institute of Genetics, Hyderabad. Brief description: working on Molecular Pathogenesis of Asthma.
3805 days ago
- +22 more Users
Blogs
Tools to detect synteny blocks regions among multiple genomes
...ether it encompasses multiple genes, an area containing single g...define synteny as “Two genes which occur on the same chro...ertain evolutionary important genes play an important role in ev...s conservation of large-scale gene order between species pairs....2601 days ago
List of gene ontology software and tools
The Gene Ontology (GO) is a set of ass...iological phrases to specific genes that are either chosen by trained curators or generated automatically. GO is des...St retrieves most significant Gene Ontology (GO) terms, KEGG and...archers, in the annotation of gene products with terms from the...3700 days ago
- +24 more Blogs
Bookmarks
- ...lying the following fundamental topics in bioinformatics: assembling genomes, comparing DNA and protein sequences, predicting genes, finding regulatory motifs, analyzing gene expression, constructing evol...
3936 days ago
Should you get sequenced? Not all bad genes predict disease
...l or potentially harmful” “As we roll out genomic medicine we are fighting against this society-wide misconception that having the bad gene means you’re going to g...3892 days ago
- +175 more Bookmarks
Files
- ...(cancer vs control either with inhibitor/not). MiRNA is small RNA molecules known to inhibit mRNA expression of particular gene by binding improperly to 3'UTR region of a gene and hence block binding of TF...
3552 days ago
- ...prise the SPAdes package and that are used for assembly of metagenomes and transcriptomes as well as assembly of putative plasmids and biosynthetic gene clusters from whole-genome se...
815 days ago
Discussion topics
- Like in case of plant genomes where nature of genome is too complex and huge in size to accomplish complete de novo assembly by current sequencing technology. What would be alternate solution? Can we live in reference free world?
3935 days ago
Pages
Bio++ : C Language libraries for your biological need
...braries for Bioinformatics, including sequence analysis,phylogenetics, molecular evolution and population genetics.Bio++ is designed in an e...ecomposition, LU decomposition, inversion, etc.Random number generation: Quick & Dirty (32b...3938 days ago
BioRuby :Ruby packages for biologist
...ent to twice or more lines of other languages because of Ruby's extremely high descriptive power. Classes for Multiple alignment (Bio::Alignment), Gene Ontology(Bio::GO), PDB (Bio::...3938 days ago
- +7 more Pages
Top-level pages
- ...Health System's Symphony of Life: Genetics & Medicine Web site."...t of the information stored in the genetic code, but also experimenta...otein 3D structure alignment, phylogenetic tree construction, predict...cleotide polymorphisms to hunt for genetic sources of deseases. Many...
3938 days ago
- ...lar biology, it’s becoming more common to generate reams of data then ask so.... Furthermore, people working in bioinformatics generally come from computer scien...Informatics: Tools for Mining and Applying Genetic Information in Patient Car...
3937 days ago
- +38 more Top-level pages
Wire posts
News
Lateral Gene Transfer Is Enriched in Cancer Samples
There has been always a confusion on cancer and bacteria relationship. This is the first paper which shows lateral gene transfer causes cancer. Find more at http://www.ploscompbiol.org/article/info%3Adoi%2F10.1371%2Fjournal.pcbi.10031073931 days ago
R package for visualising GO enrichment
...s of experimental data. This allows us to draw informative summary plots for analyses such as differential expression or clustering, where for each gene list we display its behaviour...3931 days ago
- +34 more News
Opportunity posts
Structural polymorphism analysis from NGS data
...Saclay Scientific Cluster, is seeking a bioinformatician to analyze Next Generation Sequencing (NGS) data a...al to establish a link between sequence variation, functional variation, gene/protein expression and phenot...3939 days ago
- ...l labs. The goal of this young computational systems biology group is to generate biological sense from the...ng yeast and E. coli, will be exploited to better understand two complex genetic traits: ethanol and high t...
3939 days ago
- +48 more Opportunity posts
ResearchLabs posts
The Institute for Molecular Bioscience (IMB), Bailey Lab
Pattern recognition and computational biology MEME Suite software development; gene expression; mathematical modelling; gene regulation and transcription Specialization: Pattern recognition and modelling in computational biology Link @ http://www.imb.uq.edu.au/tim-bailey3939 days ago
- ...on requires the marriage of researchers from mathematical and biological backgrounds. Research Area: Linear models for microarray data Digital gene expression technologies Dete...
3939 days ago
- +32 more ResearchLabs posts
Fun
Bioinformatician become producer/director !!!
...T : Eak khoj Munna Bhai Promoter Gene se Genome tak. Maine BLAST k...ta le jayenge Raju ban gaya Genefinder. Har Ligand jo dock ka...ai. BLAST To Hona Hi Tha !! Meri Gene Tumhare Paas Hai Aao Databas...Haan Maine Bhi ClustalW Kiya Hai GeneScan Karke Dekho Alignment Ap...3909 days ago
- ...ent was told to write "It is in my gene!!!" on the board 100 times as...00; $count++) { print "It is in my gene!!!";}I guess, he is gonna to...bsp; $startGene=$1; &n...r asked the bartender:CREATE TABLE gene IF NOT EXISTS SexOnTheBeach;
3692 days ago
Video
How Genes are Regulated: Transcription Factors
...ell types use it differently. Transcription Factors help influence which genes are used in which cell. Unde...better understand and model their binding to DNA and their regulation of gene expression. Scientific Direc...3885 days ago
DNA is packaged in a chromosome experiment
...tually form a chromosome; this both compacts DNA and creates an added layer of regulatory control, which ensures correct gene expression. Nucleosomes are thought to carry epigenetically inherited information...3867 days ago
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Bio-Scripts
Python script to download covid genome !
...seqs = seqs['genbank-sequences'] print("got %d sequences" % len(seqs)) from Bio import Entrez allseq = {} for x in seqs: if 'gene-region' in x and x['gene-region'] == "complete":...1127 days ago
Parse a genbank file using regular expressions
...print "Sequence name: $2\n"; } elsif (/(ORGANISM\s*)(.*)/) { print "Organism: $2\n"; } elsif(/(gene)(\s*)(\d*)(\.\.)(\d*)/) { print "Gene length: $5\n"; } elsi...2908 days ago
- +14 more Bio-Scripts
Tryst
Tryst with a Bioinformatician # Dr Altan Kara
...s a Bioinformatics specialist at the faculty of Gene Engineering and Biotechnology...g kit based on this profile. Alterations in the gene, transcript, protein, and met...n you will be retired, what would you tell next generation bioinformaticians?...2353 days ago
Groups
...t are Analysis of microarray data Compendia of microarrays CGH (Comparative Genomic Hybridization) microarrays Computational genetics Candidate gene prioritization by genomic dat...3934 days ago
...lying the following fundamental topics in bioinformatics: assembling genomes, comparing DNA and protein sequences, predicting genes, finding regulatory motifs, analyzing gene expression, constructing evol...3893 days ago
Tags
- Horizontal gene transfer (HGT), the transfer of genetic material between organisms, is crucial for genetic innovation and the evolution of genome architecture. Existing HGT detection algorithms rely on a strong phylogenetic signal distinguishing the transferred sequence from ancestral (vertically...
Tags: Bioinformatics, NearHGT, Horizontal, Gene, Transfer, Haifa
2865 days ago
GeneValidator - Identify problems with predicted genes
GeneValidator helps in identifing problems with gene predictions and provide useful information extracted from analysing orthologs in BLAST databases. The results produced can be used by biocurators and researchers who need accurate gene predictions. If you would like to use GeneValidator on a f...Tags: Bioinformatics, Analysis, NGS, Gene, Prediction, GeneValidator, Genome
2800 days ago
- +38 more Tags
Comments
Comment on "Tools for Differential expression analysis"
...cs research that allows researchers to identify genes that are differentially expr...expression analysis of RNA-Seq data. It uses a generalized linear model to model...A-Seq data. It uses a linear model to model the gene expression data and provides...412 days ago
Comment on "Basic command-line to run BLAST"
...tches. This is useful for identifying the function of a newly discovered gene or for understanding the evol...d researchers make many important discoveries, including identifying new genes and understanding the geneti...412 days ago
- +29 more Comments
