Results for "data"
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Comment on "Short-read assembly using Spades !"
...parameters used for SPAdes and the evaluation tools may vary depending on the specific research question and the characteristics of the sequencing data....406 days ago
- ...ution, insertion, and deletion errors. dwgsim: dwgsim is a short read simulator that can generate synthetic reads from whole genome sequencing data. It is designed to simulate r...
406 days ago
Comment on "Short-read assembly using Spades !"
...cial website (http://cab.spbu.ru/software/spades/). It is available for Linux, macOS, and Windows operating systems. Prepare the input data: The input data should be in FASTQ format, wh...412 days ago
Comment on "Tools for Sequence translation !"
...f converting a DNA or RNA sequence into its corresponding protein sequence. This is an important step in the analysis of genomic and transcriptomic data. There are several tools avai...412 days ago
Comment on "Tools for Differential expression analysis"
...widely used for analyzing RNA-Seq data. It uses a negative binomial distribution to model the count data and provides methods for esti...analysis of microarray and RNA-Seq data. It uses a linear model to mo...fic research question, the type of data, and the user's familiarity w...412 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
...ces: Download the genome sequences of the selected species from a public database, such as NCBI or Ensembl....ts of the synteny analysis by comparing them to other sources of genomic data, such as gene expression or f...414 days ago
Comment on "Far Manager Commands and Links !"
...2. Now we need to create a connection to our server. Let's say you have data for connecting via SSH:Login:...t 22As suggested to create a new session, press Shift + F4 and enter the data:931 days ago
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
...n Medical Research (4.472 :: 3.734) Database: The Journal of Biological Databases and Curation (3.372 :: 4...0.766 :: 0.756) International Journal of Data Mining and Bioinformatics&nbs...Reports (5.578 :: 5.597) Scientific Data FEBS Journal (4.001 ::...1095 days ago
Comment on "List of non-commercial NGS genotype-calling software"
...framework for structural variant discovery. [ paper-2014 ] manta – Structural variant and indel caller for mapped sequencing data. [ paper-2015 ]grid...1133 days ago
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
IEEE Transactions on Knowledge and Data Engineering accepts bioinformatics and algorithms manuscripts https://www.computer.org/csdl/journal/tk1261 days ago
