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- Jit@jit.aber
Jit bookmarked NextDenovo: string graph-based de novo assembler for TGS long reads 2442 days ago

NextDenovo is a string graph-based de novo assembler for TGS long reads. It uses a "correct-then-assemble" strategy similar to canu, but requires significantly less computing resources and storages. After assembly, the per-base error rate...

https://github.com/Nextomics/NextDenovo
- Shruti Paniwala@shruti
Shruti Paniwala commented on a bookmark List of Bioinformatics Vacancy, Jobs, Opportunity websites 2443 days ago

Bioinformatics jobs in USA https://jooble.org/jobs-bioinformatics
- Shruti Paniwala@shruti
Shruti Paniwala commented on a bookmark List of Bioinformatics Vacancy, Jobs, Opportunity websites 2443 days ago

Bioinformatics job at https://www.isme-microbes.org/job-adverts
- Jit@jit.aber
Jit bookmarked RePS: Repeat-masked Phrap with scaffolding, a WGS sequence assembler 2443 days ago

RePS (Repeat-masked Phrap with scaffolding), a WGS sequence assembler, that explicitly identifies exact kmer repeats from the shotgun data and removes them prior to the assembly. The established software Phrap is used to compute meaningful error...

ftp://ftp.genomics.org.cn/pub/ricedb/Tools/RePS/RePS-IBM-AIX.tar.gz
- Shruti Paniwala@shruti
Shruti Paniwala posted to the wire 2444 days ago

BioPython tutorial http://biopython.org/DIST/docs/tutorial/Tutorial.html #BioPython #Tutorial
- Shruti Paniwala@shruti
Shruti Paniwala bookmarked DeCoSTAR: Reconstructing the Ancestral Organization of Genes or Genomes Using Reconciled Phylogenies 2444 days ago

DeCoSTAR computes adjacency evolutionary scenarios using a scoring scheme based on a weighted sum of adjacency gains and breakages. Solutions, both optimal and near-optimal, are sampled according to the Boltzmann–Gibbs distribution centered...

https://github.com/YoannAnselmetti/DeCoSTAR_pipeline
- Jitendra Narayan@admin
Jitendra Narayan posted a new ad in the Opportunity 3 PhD positions available in the area of Bioinformatics/Computational Biology at ulster.ac.uk 2445 days ago
- Jitendra Narayan@admin
Jitendra Narayan posted to the wire 2445 days ago

12 new chapters and 365 opportunities to do things right, correct your mistakes, go after your dreams. Happy New Year 2020 #BOLover #2020 #HappyNewYear
- BioStar@biostar
BioStar published a news post Artificial intelligence is more accurate than doctors in diagnosing breast cancer 2445 days ago

Artificial intelligence is more accurate than doctors in diagnosing breast cancer from mammograms, a study in the journal Nature suggests.
- Neel@neelam
Neel commented on a bookmark List of Bioinformatics Vacancy, Jobs, Opportunity websites 2446 days ago

Bioinformatics jobs at Liverpool https://my.corehr.com/pls/ulivrecruit/erq_search_version_4.start_search_with_params
- Jit@jit.aber
Jit commented on a bookmark Machine learning training and courses in bioinformatics ! 2447 days ago

Deep learning in bioinformatics @ https://arxiv.org/pdf/1603.06430.pdf
- Rahul Nayak@rahul
Rahul Nayak bookmarked Machine learning training and courses in bioinformatics ! 2447 days ago

Machine learning techniques have been successful in analyzing biological data because of their capabilities in handling randomness and uncertainty of data noise and in generalization. In this class, we will learn basics about probabilistic models...

http://homes.sice.indiana.edu/yye/lab/teaching/spring2017-I529/
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- Jit@jit.aber
  
  Jit 2447 days ago
  Deep learning in bioinformatics @ https://arxiv.org/pdf/1603.06430.pdf
- Rahul Nayak@rahul
Rahul Nayak posted to the wire 2447 days ago

#PostDoc #opportunity at Finland https://predatorpreyinteractions.com/opportunities/
- Rahul Nayak@rahul
Rahul Nayak created a page World promising health companies ! 2447 days ago

The health care industry is expected to sustain stable growth over the next decade for a variety of reasons. Advances in medicine have prolonged the average lifespans of most people, requiring more health care treatments over longer terms. In years...
- Jit@jit.aber
Jit posted to the wire 2450 days ago

Science News’ favorite #fossils of 2019 https://www.sciencenews.org/article/science-news-favorite-fossils-2019-yir
- Neel@neelam
Neel bookmarked WOS-C Women Scientist Scheme KIRAN-IPR 2451 days ago

Women Scientist Scheme WOS-C is one among the most coveted programs that Women Scientists in India apply for. It is an initiative started by the Government of India, Department of Science & Technology (DST) to help women scientists in India to...

http://115.112.95.114/wosc/online/Control.do?_main=488t3s
- Jit@jit.aber
Jit bookmarked LibsDyogen: Libibrary for comparative genomics 2453 days ago

Library of usual classes and functions written in python and used in the Dyogen team for comparative genomics applications. Collaborative python library used in the DYOGEN teamfor studying the evolution of gene order in...

https://github.com/DyogenIBENS/LibsDyogen
- Jit@jit.aber
Jit commented on the blog Important Journals, Blogs and Forums for Bioinformaticians 2454 days ago

The Journal of Logic and Computation accept bioinformatics algorithms ans methods papers. https://academic.oup.com/logcom
- Jit@jit.aber
Jit commented on the blog Tools to detect synteny blocks regions among multiple genomes 2454 days ago

SynChro seems to be the fastest synteny detection tool. http://www.lcqb.upmc.fr/CHROnicle/SynChro.html https://pdfs.semanticscholar.org/5320/68e328d1aaefa435eefe679f54c018e5c2aa.pdf The paper conclude: SynChro is a fast, efficient and...
- Jit@jit.aber
Jit answered the question How to fix the following error while compiling MCSCanX ! 2455 days ago

Follow these steps: (base) ➜ MCScanx git:(master) ✗ for f in msa.h dissect_multiple_alignment.h detect_collinear_tandem_arrays.h ; do sed -i '1 i\#include <unistd.h>' $f ; done(base) ➜ MCScanx git:(master) ✗...

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