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Jitendra Narayan
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Jitendra Narayan
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Ram Yash Pal
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Ram Yash Pal
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Jit
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4409 days ago
The best bioinformatics chapter for beginners
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Rahul Agarwal
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Rahul Agarwal
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4410 days ago
Scalpel-Genetic variants discovery tool !
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Alok Prajapati
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Alok Prajapati
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Commercial and public next-gen-seq (NGS) software
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Next Generation Sequencing (NGS)
4410 days ago
HiChIP: a high-throughput pipeline for integrative analysis of ChIP-Seq data http://www.biomedcentral.com/1471-2105/15/280/abstract
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Martin Jones
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Martin Jones
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Commercial and public next-gen-seq (NGS) software
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Next Generation Sequencing (NGS)
4410 days ago
dDocent: a RADseq, variant-calling pipeline designed for population genomics of non-model organisms https://peerj.com/articles/431/
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Commercial and public next-gen-seq (NGS) software
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Next Generation Sequencing (NGS)
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VarScanvariant detection in massively parallel sequencing data http://varscan.sourceforge.net/
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Jit
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Jit
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4410 days ago
Plant Ontology Database
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Rahul Agarwal
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Rahul Agarwal
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Using Interval Trees to Query Genome Annotations by Position
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Python Everywhere
4411 days ago
To work on query related to overlapping genomic features: use IntervalTree python...
Rahul Agarwal
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Rahul Agarwal
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Subprocess pkg
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Python Everywhere
4411 days ago
Subprocess is one of simplest way of running linux command from within python code Example: if you want to run fastqc for QC of fastq file: from subprocess import Popen,PIPE,call p=Popen(["fastqc","-f","fastq","-o",...
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Radha Agarkar
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Bioinformatics Infrastructure Facility (BIF)
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