Mobyle, to provide a flexible and usable Web environment for defining and running bioinformatics analyses. It embeds simple yet powerful data management features that allow the user to reproduce analyses and to combine tools using a hierarchical...
Alien_hunter is an application for the prediction of putative Horizontal Gene Transfer (HGT) events with the implementation of Interpolated Variable Order Motifs (IVOMs).
An IVOM approach exploits compositional biases using variable order motif...
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With sudden exposion of big data in life sciences , now there are many companies want to exploit these data in any form or any application related to daily life which affect us in some way.
This group can be used to enlist all the companies or...
You can try BBmap / randomreads.sh
./randomreads.sh []
Written by Brian BushnellLast modified May 26, 2015
Description: Generates random synthetic reads from a reference genome. Read names indicate their genomic origin.Allows precise...
proovread : large-scale high-accuracy PacBio correction through iterative short read consensus
outperforms PacBioToCA/LSC in terms of accuracy and contiguity/sensitivity (http://dx.doi.org/10.1093/bioinformatics/btu392)
is easy to...
LRCstats is an open-source pipeline for benchmarking DNA long read correction algorithms for long reads outputted by third generation sequencing technology such as machines produced by Pacific Biosciences. The reads produced by third generation...