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sudo apt-get install libgd-svg-perl to install GD::SVG #Perl #Linux #Install #Graph #Plot

A program for unsupervised binning of metagenomic contigs by using nucleotide composition, coverage data in multiple samples and linkage data from paired end reads. Warning! This software is to be considered under development. Functionality and the...

MaxBin is software for binning assembled metagenomic sequences based on an Expectation-Maximization algorithm. Users can understand the underlying bins (genomes) of the microbes in their metagenomes by simply providing assembled metagenomic...

Scripts required to calculate tetramer frequencies and create input files for ESOM https://github.com/tetramerFreqs/Binning #Bin #Tetramer

Steps for #Prokaryotic #genome #assembly and #annotation http://www.edamamecourse.org/docs/metagenome_assembly_and_annotation.html

Prokka is a software tool for the rapid annotation of prokaryotic genomes. A typical 4 Mbp genome can be fully annotated in less than 10 minutes on a quad-core computer, and scales well to 32 core SMP systems. It produces GFF3, GBK and SQN files...

MetaBAT, An Efficient Tool for Accurately Reconstructing Single Genomes from Complex Microbial Communities Grouping large genomic fragments assembled from shotgun metagenomic sequences to deconvolute complex microbial communities, or metagenome...