Wire posts tagged with 'assembly'
By Abhi 1085 days agoTools for building de novo transcriptome assembly https:// www.sciencedirect.com/ science/ article/ pii/ S2214662817301032 #Trnscripttomics #Assembly - By LEGE 1146 days agoMinimizer-space de Bruijn graphs: Whole-genome assembly of long reads in minutes on a personal computer https:/
/ www.cell.com/ cell-systems/ fulltext/ S2405-4712(21)00332-X #msDBG #Assembly #Genome - By Jit 1601 days agoNew #phased #genome #assembly revealed, scandalous #rotifers have #homologous #chromosomes ! https:/
/ www.biorxiv.org/ content/ 10.1101/ 2020.06.16.155473v1 - By Jit 1737 days ago#Improving draft #assemblies by iterative mapping and #assembly of short reads to eliminate #gaps https:/
/ genomebiology.biomedcentral.com/ articles/ 10.1186/ gb-2010-11-4-r41 - By Jit 1797 days ago#BlobToolKit can be used during #assembly to filter non-target DNA, helping researchers produce assemblies with high biological credibility. https:/
/ blobtoolkit.genomehubs.org/ view #Genome #Blob #Con - By Jit 1945 days agoTranscript assembly and quantification for RNA-Seq https:/
/ github.com/ mpertea/ stringtie2 #Transcript #assembly - By Jit 1962 days agoNanopore sequencing and #assembly of a human genome with ultra-long reads https:/
/ www.nature.com/ articles/ nbt.4060 - By Abhimanyu Singh 1979 days agoInformatics for #RNA-seq: A web resource for analysis on the cloud https:/
/ github.com/ griffithlab/ rnaseq_tutorial/ wiki #Scripts #Assembly - By Rahul Nayak 2083 days agoDe novo genome assembly https:/
/ astrobiomike.github.io/ genomics/ de_novo_assembly #Genome #Assembly #DeNovo #Genome - By Rahul Nayak 2083 days agoErrors in sequence assembly and corrections (Bioinformatics) http:/
/ what-when-how.com/ bioinformatics/ errors-in-sequence-assembly-and-corrections-bioinformatics/ #Assembly #Error - By Rahul Nayak 2083 days ago
- By Jit 2100 days agosamtools mpileup -uf reference.nt mapping.bam | bcftools call -c | vcfutils.pl vcf2fq > consensus.fasta #Genome #Assembly #Reference
