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- Jit@jit.aber
Jit posted to the wire 2968 days ago

exfat on ubuntu $ sudo apt-get install exfat-utils exfat-fuse #exfat #ubuntu #mount
- Jit@jit.aber
Jit bookmarked PHYMMBL 2969 days ago

Metagenomics sequencing projects collect samples of DNA from uncharacterized environments that may contain hundreds or even thousands of species. One of the main challenges in analyzing a metagenome is phylogenetic classification of raw sequence...

http://www.cbcb.umd.edu/software/phymm/
- Jit@jit.aber
Jit bookmarked VirMet 2969 days ago

Watch out: only a few files are counted in coverage statistics. Full documentation on Read the Docs. A set of tools for viral metagenomics. virmet is called with a command subcommand syntax: virmet fetch --viral n, for example,...

https://github.com/ozagordi/VirMet
- Shruti Paniwala@shruti
Shruti Paniwala bookmarked BBMap help 2969 days ago

BBMAP • a solution for everything That content has been reformatted and it is being expanded to include more information. There are common options for most BBMap suite programs and depending on the file extension the input/output format...

https://www.biostarhandbook.com/tools/bbmap/bbmap-help.html
- EagleEye@santhilalsubhash
EagleEye is now a friend with Rahul Agarwal 2970 days ago
EagleEye@santhilalsubhash
Rahul Agarwal@raag
- Rahul Agarwal@raag
Rahul Agarwal is now a friend with EagleEye 2970 days ago
Rahul Agarwal@raag
EagleEye@santhilalsubhash
- EagleEye@santhilalsubhash
EagleEye is now a friend with Anjana 2972 days ago
EagleEye@santhilalsubhash
Anjana@anjana
- Anjana@anjana
Anjana is now a friend with EagleEye 2972 days ago
Anjana@anjana
EagleEye@santhilalsubhash
- Rahul Agarwal@raag
Rahul Agarwal posted to the wire 2972 days ago

Identify and Remove Outlier Samples!! https://labs.genetics.ucla.edu/horvath/CoexpressionNetwork/HumanBrainTranscriptome/Identification%20and%20Removal%20of%20Outlier%20Samples%20-%20Illumina.pdf #Re
- saratha@saratha
saratha is now a friend with Jitendra Narayan 2972 days ago
saratha@saratha
Jitendra Narayan@admin
- Jitendra Narayan@admin
Jitendra Narayan is now a friend with saratha 2972 days ago
Jitendra Narayan@admin
saratha@saratha
- Jitendra Narayan@admin
Jitendra Narayan bookmarked AccNET 2972 days ago

AccNET is a Perl application that presents a new way to study the accessory genome of a given set of organisms. Using the proteomes of these organisms, AccNET create a bipartite network compatible with common network analysis platforms. AccNET...

https://sourceforge.net/projects/accnet/
- Rahul Agarwal@raag
Rahul Agarwal is now a friend with Anjana 2972 days ago
Rahul Agarwal@raag
Anjana@anjana
- Anjana@anjana
Anjana is now a friend with Rahul Agarwal 2972 days ago
Anjana@anjana
Rahul Agarwal@raag
- Jit@jit.aber
Jit posted to the wire 2973 days ago

Forest plot https://cran.r-project.org/web/packages/forestplot/vignettes/forestplot.html #R #Forest #Plot #Example #Explanation #PrettyPlot
- Rahul Agarwal@raag
Rahul Agarwal posted to the wire 2973 days ago

http://www.biorxiv.org/content/early/2016/10/05/079301 #omics #genetics#sequencing #animal
- Jit@jit.aber
Jit posted to the wire 2974 days ago

R pretty scripts http://www.ncss.com/software/ncss/ncss-plots-and-graphs/ #R #Script #Plot #Idea #Graph
- Jit@jit.aber
Jit bookmarked MIRO : miRNA omics 2975 days ago

The MIRO (the miRNA omics) pipeline is a flexible and powerful tool for the analysis of miRNA (or more generall short RNA) expression using short-read deep sequencing data. In its present implementation MIRO is especially adapted for the analysis of...

http://seq.crg.es/download/software/Miro/
- Jit@jit.aber
Jit posted to the wire 2975 days ago

A perl script for mapping fasta formated sequences to multiple reference sequences using one of several alignment programs. http://seq.crg.es/download/software/Miro/doc/run_Mapping.html #Perl #Script
- Abhimanyu Singh@abhimanyu
Abhimanyu Singh posted to the wire 2975 days ago

Useful perl script http://homepages.ulb.ac.be/~dgonze/SCRIPTS/scripts.html #Perl #Script #Resource

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