This refers to haplotype phase (aka gametic phase). This essentially means knowing which allele belongs to which copy of the chromosome, or alternatively, which alleles appear together on the same chromosome.
In short-read...
Hi There,
I recently came across a new term "phasing". What does it mean? I only know it means "genes separated by chromosome" only, can anyone please explain it for me.
Thanks in advance.
Following are the steps, as suggested by @mira_talk
1. Reference sequences loaded and transformed into contigs, each contig containing exactly one read. 2. Sequence of each contig is cut into overlapping pieces (called rails). Length of rails: 2*...
MIRA follows for the ref based assembly (like mapping the reads on the reference with xxx, etc.) and if its possible to have a figure with the workflow.