BOL

PLATform for Assembling NUcleotide Sequences http://platanus.bio.titech.ac.jp/ #Platanus #Assembler #Genome

A universal genomic #coordinate translator for comparative genomics https://github.com/nedaz/kraken #Genes #Translator #Synteny

Annotation transfer pipeline MAKER http://gmod.org/wiki/MAKER_Tutorial_2013 #Maker #Annotation #Pipeline

Dynamic programming http://www.avatar.se/molbioinfo2001/dynprog/dynamic.html #Programming #Alignment #Sequence #Dynamic

A curated list of awesome pipeline toolkits ... https://github.com/pditommaso/awesome-pipeline

On linux OS you can extract human chromosome length with following command curl -s ftp://hgdownload.cse.ucsc.edu/goldenPath/hg19/database/chromInfo.txt.gz | gunzip -c

You can try fetchChromSizes for this purpose.

Is there any easiest known way to extract organism's chromosome length?

#Print all line #except those #contains a letter "T" that is not immediately followed by a "H" with: grep -v 'T[^H]'

Hmmm, I think grep can help you better  grep -v '^>' genome.fasta | tr -d '\n' | sed -e 's/\(.\)/\1\n/g' | sort | uniq -c | sort -rn