Jit
Enthusiast computational biologist with business dream !!!
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chromeister: An ultra fast, heuristic approach to detect conserved signals in extremely large...
By Jit 1023 days agogithub.com - chromeister: An ultra fast, heuristic approach to detect conserved signals in extremely large pairwise genome comparisons. USAGE: -query: sequence A in fasta format -db: sequence B in fasta format -out: output matrix -kmer Integer: k>1...Bioinfo Lab
The Institute of Bioinformatics conducts internationally renowned research and provides profound education in bioinformatics. Its research focuses on development and application of machine learning and statistical methods in biology and...genomenotebook
By Abhi 582 days agodbikard.github.io - https://dbikard.github.io/genomenotebook/ Install pip install genomenotebook How to use Create a simple genome browser with a search bar. The sequence appears when zooming in. import genomenotebook as gn g=gn.GenomeBrowser(genome_path,...PhyloHerb: A high‐throughput phylogenomic pipeline for processing genome skimming data
By Abhi 444 days agogithub.com - Phylogenomic Analysis Pipeline for Herbarium Specimens What is PhyloHerb: PhyloHerb is a wrapper program to process genome skimming data collected from plant materials. The outcomes include the plastid genome (plastome) assemblies,...
Regular Expression Cheat Sheet
By Jitendra Narayan 4154 days ago Comments (2)The Regular Expression are the sole of Perl language, and for bioinformatician it is just a magical stick to resolve gingatic string data. We did not find any good and user friendly regular expression cheat sheet, hence write our own cheat...Sorghum genome Sequenced!!
By Jit 4100 days agoRecently published paper in Nature communication provide an insight on Africa’s indigenous cereal crop sorghum.Genetics, epigenetics and disease
By Jitendra Narayan 4074 days agoRoyal Society GlaxoSmithKline Prize Lecture given by Professor Adrian Bird CBE FMedSci FRS on Tuesday 22 January 2013. Adrian Bird CBE FMedSci FRS is the Buchanan Chair of Genetics at the University of Edinburgh. The human genome sequence has been...Roth Lab
The Roth Lab seeks insight into biological systems through genome- and proteome-scale experimentation and analysis. Current computational interests: Systematic analysis of genetic epistasis to identify redundant or compensatory systems and to...The 8000 years old Tibetian gene mutation !!!
By Neel 3747 days agoA study led by University of Utah scientists is the first to find a genetic cause for the adaptation, a single DNA base pair change that dates back 8,000 years and demonstrate how it contributes to the Tibetans' ability to live in low oxygen...deepTools
By Martin Jones 3667 days agoUser-friendly tools for the normalization and visualization of deep-sequencing data
