Radha Agarkar
A Bioinformatician
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Faculty Positions at Central University of Punjab
Faculty Positions: Rolling/Open Advertisement Advt.No: T-10 (2013) Pay Scale: Pay Band Rs.15600-39100 with AGP of Rs.6,000/- Essential Qualifications for Professors, Associate Professors, and Assistant Professors: As per “UGC REGULATIONS ON...Referee: Genome assembly quality scores
By Jit 2211 days agogwct.github.io - Modern genome sequencing technologies provide a succint measure of quality at each position in every read, however all of this information is lost in the assembly process. Referee summarizes the quality information from the reads that map to a site...Kevler: Reference-free variant discovery in large eukaryotic genomes
By Jit 1762 days agogithub.com - Welcome to kevlar, software for predicting de novo genetic variants without mapping reads to a reference genome! kevlar's k-mer abundance based method calls single nucleotide variants (SNVs), multinucleotide variants (MNVs),...National Center for Bioinformatics (NCB)
NCB is offering M.Phil and Ph.D programs in the area of Bioinformatics. The major goal of NCB is to promote quality training and research in the area of Bioinformatics. Bioinformatics originated as a cross-disciplinary field as the need for...shovill: Assemble bacterial isolate genomes from Illumina paired-end reads
By BioStar 1422 days agogithub.com - Shovill is a pipeline which uses SPAdes at its core, but alters the steps before and after the primary assembly step to get similar results in less time. Shovill also supports other assemblers like SKESA, Velvet and Megahit, so you can take...Senior Research Fellow at NIT, Rourkela
NATIONAL INSTITUTE OF TECHNOLOGY, ROURKELA – 769 008(ORISSA) SPONSORED RESEARCH, INDUSTRIAL CONSULTANCY & CONTINUING EDUCATION ADVERTISEMENT NO: NITR/SR/CH-BIF/2014/30 Applications are invited on prescribed format for the following...COPE: an accurate k-mer-based pair-end reads connection tool to facilitate genome assembly
By Jit 2545 days agoftp.genomics.org.cn - An efficient tool called Connecting Overlapped Pair-End (COPE) reads, to connect overlapping pair-end reads using k-mer frequencies. We evaluated our tool on 30× simulated pair-end reads from Arabidopsis thaliana with 1% base error. COPE...Studentship and Traineeship in Bioinformatics at Barkatullah University, Bhopal
Department of Biotechnology & Bioinformatics Center Barkatullah University, Bhopal – 462 026 Studentship and Traineeship in Bioinformatics Applications are invited on plain paper from suitable candidates for Studentship and Traineeship...Reference-free prediction of rearrangement breakpoint reads
By Neel 2453 days agocode.google.com - lideSort-BPR ( b reak p oint r eads) is based on a fast algorithm for all-against-all comparisons of short reads and theoretical analyses of the number of neighboring reads. When applied to a dataset with a sequencing...Dynamic chromosome breakpoints !!!
By Jitendra Narayan 3755 days agoDuring recombination, the precise breakage of each strand, exchange between the strands, and sealing of the resulting recombined molecules happens. The “chromosomal breakpoints” refers to these places where they break.
