Radha Agarkar
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GeneProf: analysis of high-throughput sequencing experiment
By Jit 2698 days agowww.geneprof.org - GeneProf is a web-based, graphical software suite that allows users to analyse data produced using high-throughput sequencing platforms (RNA-seq and ChIP-seq; "Next-Generation Sequencing" or NGS): Next-gen analysis for next-gen data! Some of...RA WALK-IN-INTERVIEW @ ACTREC
No. ACTREC/Advt./ 7 /2015 Title of the Project Research Associate (One position) DBTs Biotechnology/Bioinformatics training centre PI Dr. Ashok Varma Duration of the Project Six Months from the date of appointment, can be extended...AIRVF: a filtering toolbox for precise variant calling in Ion Torrent sequencing
By BioStar 2529 days agosourceforge.net - AIRVF that works on flowgram, raw and mapped reads and called variants to reduce artifact-driven false variant calls. Tests on sequencing data of standard reference material showed up to ∼98% reduction of false variants when combined to...Summer Intern - Research Bioinformatics
Be proficient in LINUX, know perl or python, understand biology and Next Generation Sequencing. The intern will port Agile Assay Design pipelines into Galaxy. The intern will also learn to develope his/her own bioinformatics pipelines for PCR or...Heap: a highly sensitive and accurate SNP detection tool for low-coverage high-throughput...
By Jit 2411 days agogithub.com - Heap, that enables robustly sensitive and accurate calling of SNPs, particularly with a low coverage NGS data, which must be aligned to the reference genome sequences in advance. To reduce false positive SNPs, Heap determines genotypes and calls...JRF Bioinformatics @ IISR, Kozhikode
JRF Bioinformatics Jobs recruitment in Indian Institute of Spices Research on temporary basis Name of the Scheme : Distributed Information Sub Centre – DISC Qualifications : M.Sc/ B Tech in Bioinformatics with NET/GATE or M Tech in...ChopStitch: exon annotation and splice graph construction using transcriptome assembly and whole...
By Rahul Nayak 2336 days agogithub.com - ChopStitch is a new method for finding putative exons and constructing splice graphs using an assembled transcriptome and whole genome shotgun sequencing (WGSS) data. ChopStitch identifies exon-exon boundaries in de novo assembled RNA-seq data with...
A guide for complete R beginners :- Installing R packages
Last updated 3560 days ago by Archana MalhotraPart of the reason R has become so popular is the vast array of packages available at the cran and bioconductor repositories. In the last few years, the number of packages has grown exponentially! This is a short post giving steps on how to...NanoPack: visualizing and processing long-read sequencing data
By Jit 2297 days agogithub.com - The NanoPack tools are written in Python3 and released under the GNU GPL3.0 License. The source code can be found at https://github.com/wdecoster/nanopack, together with links to separate scripts and their documentation. The scripts are...Research Associate Bioinformatics job position in Indian Agricultural Statistics Research Institute...
Research Associate Bioinformatics job position in Indian Agricultural Statistics Research Institute (IASRI) Qualification : Ph.D. in Bioinformatics/ Agricultural Statistics/ Statistics/ Computer Science/ Computer Application/ Life Science/...
