Radha Agarkar
A Bioinformatician
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CHARLES SWANTON LAB
They are using the latest DNA sequencing technology to read the genetic makeup of cancer cells within tumours in ever greater detail, teasing out patterns of evolution (evolutionary rule books), cancer heterogeneity and working out what changes have...Center for Molecular Dynamics Nepal (CMDN), Nepal
Center for Molecular Dynamics Nepal (CMDN), established 2007 prides itself as a research driven nongovernmental organization. Unlike other civil society organizations, CMDN is dedicated entirely to promoting research in the country. With its team of...Genome assembly tutorial "Genome Assembly for short and long reads"
By Jit 2755 days ago Comments (1)bioinformaticsdotca.github.io - In this lab we will perform de novo genome assembly of a bacterial genome. You will be guided through the genome assembly starting with data quality control, through to building contigs and analysis of the results. At the end of the lab you will...Senior Research Fellow at NIT, Rourkela
NATIONAL INSTITUTE OF TECHNOLOGY, ROURKELA – 769 008(ORISSA) SPONSORED RESEARCH, INDUSTRIAL CONSULTANCY & CONTINUING EDUCATION ADVERTISEMENT NO: NITR/SR/CH-BIF/2014/30 Applications are invited on prescribed format for the following...Darwin-WGA: A Co-processor Provides Increased Sensitivity in Whole Genome Alignments with High...
By Jit 2671 days agogithub.com - Darwin-WGA, is the first hardware accelerator for whole genome alignment and accelerates the gapped filtering stage. Darwin-WGA also employs GACT-X, a novel algorithm used in the extension stage to align arbitrarily long genome sequences using a...Studentship and Traineeship in Bioinformatics at Barkatullah University, Bhopal
Department of Biotechnology & Bioinformatics Center Barkatullah University, Bhopal – 462 026 Studentship and Traineeship in Bioinformatics Applications are invited on plain paper from suitable candidates for Studentship and Traineeship...RaGOO: Fast Reference-Guided Scaffolding of Genome Assembly Contigs
By Jit 2474 days agogithub.com - Alonge M, Soyk S, Ramakrishnan S, Wang X, Goodwin S, Sedlazeck FJ, Lippman ZB, Schatz MC: Fast and accurate reference-guided scaffolding of draft genomes. bioRxiv 2019. RaGOO is a tool for coalescing genome assembly contigs into...U-Plot: Genome U-Plot sample implementation
By Rahul Nayak 2346 days agogithub.com - The Genome U-Plot is a JavaScript tool to visualize Chromosomal abnormalities in the Human Genome using a U-shape layout.Guest Faculty at Pondicherry University
Pondicherry University, India Walk in interview for guest faculty in Pondicherry University, India. For more information please visit http://www.bicpu.edu.in/bioinfor140814.pdfGenome assembly training tutorial at Galaxy !
By Jit 2047 days ago Comments (1)training.galaxyproject.org - In this tutorial we assemble and annotate the genome of E. coli strain C-1. This strain is routinely used in experimental evolution studies involving bacteriophages. For instance, now classic works by Holly Wichman and Jim Bull (Bull 1997, Bull...
