Jit
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HELIANO: A fast and accurate tool for detection of Helitron-like elements
By LEGE 661 days agogithub.com - Helitron-like elements (HLE1 and HLE2) are DNA transposons. They have been found in diverse species and seem to play significant roles in the evolution of host genomes. Although known for over twenty years, Helitron sequences are still challenging...AccessSyRI: finding genomic rearrangements and local sequence differences from whole-genome...
By Jit 2316 days agogithub.com - AccessSyRI: finding genomic rearrangements andlocal sequence differences from whole-genome assemblies SyRI, a pairwise whole-genome comparison tool for chromosome-level assemblies. SyRI starts by finding rearranged regions and then searches for...doubletrouble: identify duplicated genes from whole-genome protein sequences and classify
By LEGE 823 days agobioconductor.org - doubletrouble aims to identify duplicated genes from whole-genome protein sequences and classify them based on their modes of duplication. The duplication modes are i. segmental duplication (SD); ii. tandem duplication (TD); iii. proximal...Genome Origami
By Jitendra Narayan 4193 days agoThere are only 10,000 loops instead of the predicted millions, and they form on/off switches in DNA.Human Complete Genome
By Shruti Paniwala 1430 days agowww.science.org - Telomere-to-telomere consortium We have sequenced the CHM13hTERT human cell line with a number of technologies. Human genomic DNA was extracted from the cultured cell line. As the DNA is native, modified bases will be preserved. The data includes...TRRUST v2: an expanded reference database of human and mouse transcriptional regulatory interactions
By Rahul Agarwal 3088 days agowww.grnpedia.org - TRRUST contains 8,444 and 6,552 TF-target regulatory relationships of 800 human TFs and 828 mouse TFs, respectively. They have been derived from 11,237 pubmed articles, which describe small-scale experimental studies of transcriptional regulations....5700 year-old human genome !
By Jit 2360 days agoScientists have reconstructed the genome of an ancient human who lived nearly 5,700 years ago in Southern Denmark from the birch pitch- an ancient tar-like substance.When Chromosomes Shift: Understanding Chromosome Rearrangement and Human Disease
By BioStar 421 days agoIn the vast and complex world of genetics, our chromosomes are like carefully arranged bookshelves — each holding critical information that defines who we are. But what happens when those books are shuffled, inverted, or swapped? The answer lies in...Sequencing Solutions to World Health
By Rahul Agarwal 4663 days agowww.lifetechnologies.com - "New technology that quickly, easily and economically reveals the genomes of viruses and pathogens transforms public health and medicine." Source: Life technologies
