Rahul Nayak
A Bioinformatician
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ArrayGen Bioinformatics Genomics Group
Category: researchlabs:Bioinformatics
PI: ArrayGen Technologies
By ArrayGen Technologies 4276 days agoArrayGen is a global bioinformatics company which is a one stop solution for microarray designing and genomics data analysis. Our novel Array Design Approach Strategy (ADAS) aims to condense the time lag between demands of scientific community and...A powerful, yet simple, gene set analysis tool for interpreting RNA-seq and NGS results.
By Shani 4244 days agoLifeMap Sciences is introducing GeneAnalytics, our new gene set analysis tool, which is applicable for NGS results and differentially expressed gene lists from variable sources. GeneAnalytics provides gene associations with tissues &...Webinar on 'An integrated RNA and DNA approach to unravel genetic regulation in cancer'
By Yeshodari 4140 days agoWebinar, next generation sequencing data analysisScaffolding of a bacterial genome using MinION nanopore sequencing
By Rahul Agarwal 3993 days agowww.nature.com - Second generation sequencing has revolutionized genomic studies. However, most genomes contain repeated DNA elements that are longer than the read lengths achievable with typical sequencers, so the genomic order of several generated contigs cannot...liftover
By Jitendra Narayan 3777 days ago Comments (1)github.com - Convenient conversions between genome assemblie. The liftover package makes it easy to remap genomic coordinates to a different genome assembly. More at...Picard
By Neel 3697 days agobroadinstitute.github.io - Picard is a set of command line tools for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF. These file formats are defined in the Hts-specs repository. See especially the SAM specification and the VCF...Easyfig
By Poonam Mahapatra 3697 days agoeasyfig.sourceforge.net - Easyfig has moved to github, for newer releases of Easyfig please visit our new webpage - https://mjsull.github.io/Easyfig. Easyfig is a Python application for creating linear comparison figures of multiple genomic loci with an easy-to-use...SCALCE
By Surabhi Chaudhary 3711 days agosfu-compbio.github.io - SCALCE (/skeɪlz/, a.k.a. boosting Sequence Compression Algorithms using Locally ConsistentEncoding) is a tool for compressing FASTQ files. It is designed specifically for the Illumina-generated FASTQ files, but supports any...SPAdes
By Abhimanyu Singh 3707 days ago Comments (1)bioinf.spbau.ru - SPAdes – St. Petersburg genome assembler – is intended for both standard isolates and single-cell MDA bacteria assemblies. This manual will help you to install and run SPAdes. SPAdes version 3.7.1 was released under GPLv2 on March 8,...HOMER: Software for motif discovery and next-gen sequencing analysis
By Neel 3700 days agohomer.salk.edu - This tutorial covers topics independently of HOMER, and represents knowledge which is important to know before diving head first into more advanced analysis tools such as HOMER. Setting up your computing environment Retrieving and storing...
