Jit
Enthusiast computational biologist with business dream !!!
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PANEV: an R package for a pathway-based network visualization
By Jit 1760 days agogithub.com - PANEV (PAthway NEtwork Visualizer) is an R package set for gene/pathway-based network visualization. Based on information available on KEGG, it visualizes genes within a network of multiple levels (from 1 to n) of interconnected upstream and...chromoMap-An R package for Interactive Visualization and Annotation of Chromosomes
By Neel 2063 days agocran.r-project.org - Provides interactive, configurable and elegant graphics visualization of the chromosomes or chromosome regions of any living organism allowing users to map chromosome elements (like genes, SNPs etc.) on the chromosome plot. It introduces a special...d3Network:Tools for creating D3 JavaScript network, tree, dendrogram, and Sankey graphs from R.
By Jit 2434 days agochristophergandrud.github.io - Mike Bostock’s D3.js is great for creating interactive network graphs with JavaScript. The d3Network package makes it easy to create these network graphs from R. The main idea is that you should able to take...RCircos: an R package for Circos 2D track plots
By Jit 3120 days agobitbucket.org - RCircos package provides a simple and flexible way to make Circos 2D track plots with R and could be easily integrated into other R data processing and graphic manipulation pipelines for presenting large-scale multi-sample genomic research data. It...UpSetR: An R Package for the Visualization of Intersecting Sets and their Properties
By BioStar 2136 days agogithub.com - UpSetR generates static UpSet plots. The UpSet technique visualizes set intersections in a matrix layout and introduces aggregates based on groupings and queries. The matrix layout enables the effective representation of associated data,...chromoMap-An R package for Interactive visualization and mapping of human chromosomes
By Rahul Nayak 2353 days ago Comments (1)An R package for Interactive visualization and mapping of human chromosomespoRe: an R package for the visualization and analysis of nanopore sequencing data
By Jit 2568 days ago Comments (1)academic.oup.com - Motivation: The Oxford Nanopore MinION device represents a unique sequencing technology. As a mobile sequencing device powered by the USB port of a laptop, the MinION has huge potential applications. To enable these applications, the...ReConPlot: an R package for the visualization and interpretation of genomic rearrangements
By LEGE 356 days agoacademic.oup.com - ReConPlot (REarrangement and COpy Number PLOT), an R package that provides functionalities for the joint visualization of SCNAs and SVs across one or multiple chromosomes. ReConPlot is based on the popular ggplot2 package, thus allowing...NAViGaTOR: Network Analysis, Visualization and Graphing Toronto
By Rahul Nayak 2346 days ago142.150.188.236 - NAViGaTOR – Network Analysis, Visualization, & Graphing TORonto is a software system for scaleable visualizing and analyzing networks. The current version, NAViGaTOR 3, increases modularity, improves scaleability, extends input/output...Painless package development for R
By Abhi 3137 days agowww.rstudio.com - Devtools makes package development a breeze: it works with R’s existing conventions for code structure, adding efficient tools to support the cycle of package development. With devtools, developing a package becomes so easy that it will be...
