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HumCFS: a database of fragile sites in human chromosomes
By Abhimanyu Singh 2091 days agowebs.iiitd.edu.in - Fragile sites are specific chromosomal region that exhibit an increased frequency of chromosdomal breakge when cells are exposed to replicative stress. Since from the discovery of chromosomal fragile sites/regions (CFS), several line of evidence...BUSCO datasets !
By Jit 1458 days agobusco-data.ezlab.org - The BUSCO software now directly downloads the necessary datasets, specified by the user or automatically selected. To display all available datasets busco --list-datasets You can also download them manually and see...dbCAN: a web server and DataBase for automated Carbohydrate-active enzyme ANnotation
By Jit 2783 days agocsbl.bmb.uga.edu - dbCAN is a web server and DataBase for automated Carbohydrate-active enzyme ANnotation, funded by the BioEnergy Science Center of the DOE. Similar resources on the web include CAZy database and CAT. All...Want to Know which genome assembler rule the world ?
Started by Rahul Agarwal 4170 days ago Replies (3) Last reply by Rahul Nayak 2200 days agoAssemblathon 2: evaluating de novo methods of genome...How DNA is Packaged (Advanced)
By Jitendra Narayan 4127 days agoEach chromosome consists of one continuous thread-like molecule of DNA coiled tightly around proteins, and contains a portion of the 6,400,000,000 basepairs (DNA building blocks) that make up your DNA. Originally created for DNA Interactive (...Nucl2Vec: Local alignment of DNA sequences using Distributed Vector Representation
By Jit 1396 days agoprakharg24.github.io - We demonstrate a novel approach forlocal alignment of DNA reads with respect to reference genome.For this process we have used Skip-gram model for creatingencoding(Nucl2Vec) and k-nearest neighbor for the alignment.With our new approach we have...DNA Transcription (Advanced)
By Jitendra Narayan 3634 days agoTranscription is the process by which the information in DNA is copied into messenger RNA (mRNA) for protein production. Originally created for DNA Interactive ( http://www.dnai.org ). TRANSCRIPT: The Central Dogma of Molecular Biology: "DNA makes...FSA: Fast Statistical Alignment
By Jit 2895 days agofsa.sourceforge.net - FSA is a probabilistic multiple sequence alignment algorithm which uses a "distance-based" approach to aligning homologous protein, RNA or DNA sequences. Much as distance-based phylogenetic reconstruction methods like Neighbor-Joining build a...Tetra-Nucleotide Analysis
By Jit 2808 days agochunlab.wordpress.com - A tetra-nucleotide is a fragment of DNA sequence with 4 bases (e.g. AGTC or TTGG). Pride et al. (2003) showed that the frequency of tetra-nucleotides in bacterial genomes contain useful, albeit weak, phylogenetic signals. Even though...
