Our Sponsors
Related items
RNA Sequencing Helps Identify Functional Variants from GWAS
By Andaleeb 4010 days agoschizophreniaforum.org - For Alzheimer’s and other complex disorders, mining the genome for disease-associated variants is no longer the obstacle. The challenge nowadays is figuring out how the identified loci relate to disease. As reported last month in Nature and...NCBI PSI-BLAST Tutorial
By Jitendra Narayan 4102 days agohttp:--www.biotechnology.jhu.edu- Tutorial for PSI-BLAST, an extension of BLAST that uses matrix algebra. BLAST is a cornerstone bioinformatics tool at NCBI. BLAST is the Basic Local Alignment Search tool and will protein and DNA sequences that are...NCBIBLAST+ 2.14.1 now available
By Neel 443 days agoNCBIBLAST+ 2.14.1 now available with improved documentation, faster and more reliable database downloads, and some bug fixes.GIGGLE: a search engine for large-scale integrated genome analysis
By Jit 2501 days agogithub.com - GIGGLE is a genomics search engine that identifies and ranks the significance of genomic loci shared between query features and thousands of genome interval files. GIGGLE (https://github.com/ryanlayer/giggle) scales to billions of intervals and is...MMseqs2: ultra fast and sensitive sequence search and clustering suite
By Manisha Mishra 1396 days agogithub.com - MMseqs2 (Many-against-Many sequence searching) is a software suite to search and cluster huge protein and nucleotide sequence sets. MMseqs2 is open source GPL-licensed software implemented in C++ for Linux, MacOS, and (as beta version, via cygwin)...sourmash: Quickly search, compare, and analyze genomic and metagenomic data sets.
By BioStar 132 days agogithub.com - sourmash is a k-mer analysis multitool, and we aim to provide stable, robust programmatic and command-line APIs for a variety of sequence comparisons. Some of our special sauce includes: FracMinHash sketching, which enables accurate...Orange: Data mining
By BioStar 612 days agoorangedatamining.com - Open source machine learning and data visualization. Build data analysis workflows visually, with a large, diverse toolbox.Bioinformatics Codes Search
By Jitendra Narayan 4109 days agocode.ohloh.net - I bet, this website will be your best friend in near future. This helps us to explore the existing open source codes and learn from it. You can find some useful open source bioinformatics codes for your analysis work. You can use the left bar...
Tools for Searching Repeats And Palindromic Sequences
Last updated 2405 days ago by Poonam Mahapatra Comments (2)What are genomic interspersed repeats? In the mid 1960's scientists discovered that many genomes contain stretches of highly repetitive DNA sequences ( see Reassociation Kinetics Experiments, and C-Value Paradox ). These sequences were later...
