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FGENESH - Program for predicting multiple genes in genomic DNA sequences
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By Neel 2377 days agogithub.com - RepeatModeler2 represents a valuable addition to the genome annotation toolkit that will enhance the identification and study of TEs in eukaryotic genome sequences. RepeatModeler2 is available as source code or a containerized package under an open...sourmash: Quickly search, compare, and analyze genomic and metagenomic data sets.
By BioStar 700 days agogithub.com - sourmash is a k-mer analysis multitool, and we aim to provide stable, robust programmatic and command-line APIs for a variety of sequence comparisons. Some of our special sauce includes: FracMinHash sketching, which enables accurate...Genome assembly stats plotting
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Is reference genome necessary for gene expression study in transcriptome sequencing or for variant discovery in genome sequencing?
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