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Mitochondrial genome assembly tools !
Last updated 1102 days ago by AbhiMitochondrial genome assembly tools are specialized software and algorithms designed to accurately reconstruct the mitochondrial genome (mitogenome) from sequencing data, typically obtained through techniques like next-generation sequencing (NGS)....
Regular Expression Cheat Sheet
By Jitendra Narayan 4812 days ago Comments (2)The Regular Expression are the sole of Perl language, and for bioinformatician it is just a magical stick to resolve gingatic string data. We did not find any good and user friendly regular expression cheat sheet, hence write our own cheat...320000 viruses in mammals yet to sequenced in future!!!
By Rahul Agarwal 4757 days ago70 per cent of emerging viral diseases such as HIV/AIDS, West Nile, Ebola, SARS, and influenza, are zoonoses - infections of animals that cross into humans.Tools to detect synteny blocks regions among multiple genomes
By Jitendra Narayan 4743 days ago Comments (24)Collections of synteny detection tools and related materialsMedGenome is looking for Genome Analysts
MedGenome is looking for Genome Analysts (5-6 Positions), ambitious and energetic who will work both independently and as part of a collaborative team to generate data from various genomics-oriented workflows and assist in the optimization and...-
Perl one-liner for bioinformatician !!!
Last updated 4488 days ago by Abhimanyu Singh Comments (3)With the emergence of NGS technologies, and sequencing data most of the bioinformaticians mung and wrangle around massive amounts of genomics text. There are several "standardized" file formats (FASTQ, SAM, VCF, etc.) and some tools for manipulating... Dynamic chromosome breakpoints !!!
By Jitendra Narayan 4412 days agoDuring recombination, the precise breakage of each strand, exchange between the strands, and sealing of the resulting recombined molecules happens. The “chromosomal breakpoints” refers to these places where they break.A 3D Map of the Human Genome
By Jitendra Narayan 4291 days agoSuhas Rao and Miriam Huntley (of the Aiden Lab) describe a 3D map of the human genome at kilobase resolution, revealing the principles of chromatin looping. Guest Origami Folding: Sarah Nyquist. Suhas S.P. Rao*, Miriam H. Huntley*, Neva C. Durand,...Google Genomics
By Tenzin Paul 4286 days agocloud.google.com - Explore genetic variation interactively. Compare entire cohorts in seconds with SQL-like queries. Compute transition/transversion ratios, genome-wide association, allelic frequency and more. Process big genomic data easily. Run batch analyses...-
Software packages for next gen sequence analysis
Last updated 4102 days ago by Rahul Nayak Comments (5)Integrated solutions * CLCbio Genomics Workbench - de novo and reference assembly of Sanger, Roche FLX, Illumina, Helicos, and SOLiD data. Commercial next-gen-seq software that extends the CLCbio Main Workbench software. Includes SNP detection,...
