Results for "Graph-theory based studies"
Users
Skills: Graph-theory based studies1809 days ago
Blogs
Five unique traits of effective computational biologist
Bioinformatics research is driven by large set of software, scripts, and tools to analyse gigantic biological data. Being a great biological programmer or bioinformatic...4000 days ago
Five points for bioinformatics software/tools
In the bioinformatics sector we mostly spend time on computational analysis of huge amounts of data and try to mak...utational and analysis work, most of the reviewer also prefers the open source based r...3757 days ago
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Bookmarks
Well designed regular expression cheat sheet
In our computational biology work, we mostly play with DNA or AA string. For string based programming work this regular expression cheat sheet is really helpful. Keep it handy.3999 days ago
DAVI: Deep learning-based tool for alignment and single nucleotide variant identification
DAVI consists of models for both global and local alignment and for variant calling. We have evaluated the perform...s used for bench-marking. We further demonstrate that while existing tools are based o...1195 days ago
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Files
Master Thesis: Trans-membrane topology prediction through Markov based decoders
Abstract: Background/Motivation: The dearth of structural information on alpha helic...us far the development of reliable knowledge –based potentials that can be used f...alpha helices in membrane-spanning proteins. It is based o...3994 days ago
India's own first drug - from Biocon.
Psoriasis is immune-mediated disease that effects the skin. the Disease on an averag.... Biocon tell to the media that genotypic played a critical role in functional studies and clinical trial Genomics....3969 days ago
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Discussion topics
Which are the best statistical programming languages to study for a bioinformatician?
In Bio-informatics based genome sequencing and predicting metabolic pathways research jobs I used Matlab, SAS, SPSS, R and several Bioconductor packages....4001 days ago
Pages
Bio++ : C Language libraries for your biological need
C has always been a language that never attempts to tie a programmer down - it allows for easy implementation, it...ol. 2006 Oct;55(5):756-68.Dutheil J, Pupko T, Jean-Marie A, Galtier N. A model-based a...3997 days ago
- I found several useful bioinformatics articles which exaplain, define and elaborate the bioinformatics in sci...ning Geoff Barton's review. Pattern matching and motifs Knowledge-based A...
3970 days ago
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Top-level pages
- "Bioinformatics is a science of biological predictions and analysis" -- Jitendra N...ionality, e.g. they can search for similar articles based on word–usage analysis....tly by combining statistical with force–field based a...
3996 days ago
- Data mining, the extraction of hidden predictive information from large databases. Data mining is becoming an incr...ewdoc/download?doi=10.1.1.106.385&rep=rep1&type=pdf Towards knowledge-based g...
3995 days ago
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Wire posts
News
- This pdf based tutorial in good resource to understand the basic of Perl in a day http://ritg.med.harvard.edu/training/perl/RC_Perl_Intro.pdf
3970 days ago
Webinar: Wednesday 21 August 2013 at Noon EDT
This webinar will describe the use of combinatorial pooling to reconstruct gene sequences within BACs. Recent work...e knowledge is sufficient to support critical end-point objectives such as map-based c...3969 days ago
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Opportunity posts
- van Noort Group is looking for PhD fellows We currently access an unprecedented knowledge on the basic componen...actions between alleles, for example through functional gene networks that are based o...
3998 days ago
- At TU Dresden, Faculty of Computer Science, the DFG Research Training Group GRK 1907 “Role-based Software Infrastructures for continuous-context-sensitive Systems” offers the positions of 6 PhD Stude...
3997 days ago
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ResearchLabs posts
- Melanie Bahlo is an applied statistician working in the areas of statistical genetic...ntly related individuals CNV analysis in pedigrees and connections to linkage studies Statistical Genetics Link...
3997 days ago
The Centre for Bioinformatics, Biomarker Discovery and Information-Based Medicine (CIBM)
The Centre for Bioinformatics, Biomarker Discovery and Information-Based Medicine (CIBM) is committed to shortening the process of obtaining novel discoveries to achieve distinctively bet...3997 days ago
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Video
Computational Biology in the 21st Century: Making Sense out of Massive Data
Computational Biology in the 21st Century: Making Sense out of Massive Data Air date: Wednesday, February 01, 2012, 3:00:00 PM Category: Wednesday Afternoon...3951 days ago
Computer Theory & Genetics: George Chao at TEDxUMNSalon
George Chao is an undergraduate senior studying Genetics and Computer Science at the University of Minnesota. Having started genetics research as soon as he entered the...3965 days ago
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Bio-Scripts
Extracting FASTA sequences based on position with perl script !!
#!/usr/bin/env perl #Uses: perl sub-seq.pl input.txt range use strict; use warnings; my $end = pop; my $start = pop; local $/ = '>'; while () {...2671 days ago
- # Count k-mer occurrence using Jellyfish 2.2.6 jellyfish count -t 8 -C -m 19 -s 5G -o 19mer_out --min-qual-char=? sread_1.fastq sread_2.fastq # points for a histogram jellyfish histo -o 19mer_out.histo 19mer_out #Plot results using R ##load the data into dataframe19 dataframe19
2313 days ago
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Tryst
Tryst with a Bioinformatician # Dr Altan Kara
Dr Altan Kara is a Bioinformatics specialist at the faculty of Gene Engineering and Biotechnology Institut...ugh an integrated approach, and to develop an early diagnosis and scanning kit based o...2411 days ago
Groups
Our research interest falls in the broad field of bioinformatics and, more specifica...base Developement MigraineDB AntioxDB Molecular Modelling and Docking Studies Note: This BOL research gr...3992 days ago
Metabolomics is the comprehensive and quantitative analysis of multiple metabolites...r four main purposes: 1) controlled trials2) dietary intakes in observational studies3) explaining the biological e...3755 days ago
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