Comment on "Tools for RNA classification"
...ariance model approach to identify RNA homologs. It is particularly useful for identifying non-coding RNA (ncRNA) sequences. Rfam: Rfam is a database of RNA families and their cor...451 days ago
Comment on "Basic command-line to run BLAST"
BLAST compares a query sequence to a database of known sequences and identifies the most similar matches. Thi...ments, called "words," and searching for matches to those words in the database. It then expands the matches...451 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
...olutionary relationship or biological interest. Obtain the genome sequences: Download the genome sequences of the selected species from a public database, such as NCBI or Ensembl. Ge...454 days ago
Comment on "Basic command-line to run BLAST"
...ely used program for searching a database of sequences to find those th...o different types of queries and databases. The most common programs ar...local searches. Choose the database: BLAST searches can be perfor...rful tool for searching sequence databases and can be used for many dif...454 days ago
Comment on "Download desire version of Blast software !"
Blast database version 4 @ https://ftp.ncbi.nlm.nih.gov/blast/db/v4/973 days ago
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
...981 :: 8.136) PLOS Computational Biology (4.620 :: 5.279) Statistical Methods in Medical Research (4.472 :: 3.734) Database: The Journal of Biological Databases and Curation (3.372 :: 4.510...1135 days ago
Comment on "BLAST nr version 5 database, (nr_v5)"
Blast database version5 tutorial https://ftp.ncbi.nlm.nih.gov/blast/db/v5/blastdbv5.pdf1414 days ago
Comment on "Installing Bio::SCF perl module"
jit@jit-HP-Pro-3335-MT:~/Downloads$ sudo cpan -T install Bio::SCP[sudo] password for jit: Loading internal null logger. Install Log::Log4perl for logging messagesReading '/home/jit/.cpan/Metadata' Database was generated on Fri, 13 Mar 2020 03:55:17 GMTinstall is up to date (0.01).1473 days ago
Comment on "Setting up autoConTAMPR !"
...tics-distributions-perl.(Reading database ... 43981 files and directori...bclass-methodmaker-perl.(Reading database ... 43989 files and directori...package libstaden-read1.(Reading database ... 44971 files and directori...ing '/root/.cpan/Metadata' Database was generated on Sun, 24 May...1473 days ago
Comment on "New Layout for BLAST ftp Database Site"
The transition to the new default database version, dbV5, for BLAST+ is now complete. For more details please see Blog. Team also uploaded a 2019-nCoV Sequences (Wuhan coronavirus) database to our FTP site, labeled Betacoronavirus.1583 days ago