1021 days ago
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934 days ago
UniqueKmer: Generate unique KMERs for every contig in a FASTA file
Generate unique k-mers for every contig in a FASTA file. Unique k-mer is consisted...which is an ultra-fast tool to identify and visualize microbial sequences from sequencing data. https://github.com/Ope...929 days ago
895 days ago
Smudgeplot: Inference of ploidy and heterozygosity structure using whole genome sequencing data
This tool extracts heterozygous kmer pairs from kmer count databases and performs gymnastic...gle genome structure by comparing the sum of kmer pair coverages (CovA + CovB) to th...w the haplotype structure using heterozygous kmer pairs. For...859 days ago
786 days ago
Quip: Aggressive compression of FASTQ, SAM and BAM files.
This will help us to reduce the amount of drive space we take up and decrease data transfer times Quip compresses next-generation sequencing data with extreme prejudice....771 days ago
Choosing the Right NGS Sequencing Instrument for Your Study
The right sequencing instrument for your study depends on your project goal. Se...truments available. If you’re new to high-throughput sequencing and have questions about how you should design your sequencing run, fill out our free c...749 days ago
HairSplitter: assembling long reads in an unknown number of haplotypes
Pros and cons of HairSplitter Limitations of HairSplitt...ypes and distinguish repeated elements Only needs sequencing reads, potentially error-pron...ypes and distinguish repeated elements Only needs sequencing reads, potentially error-pron...574 days ago