1426 days ago
1405 days ago
DADA2: Fast and accurate sample inference from amplicon data with single-nucleotide resolution
...each ITS read, a key step due to the variable length of the ITS region. Short demonstrations of assigning taxonomy and assigning species to sequences....1315 days ago
Liftoff: An accurate GFF3/GTF lift over pipeline
Liftoff is a tool that accurately maps annotations in GFF or GTF between assemblies of the same, or closely-related species. Unlike current coordinate lift-over tools which require a...1276 days ago
Kmer: a suite of tools for DNA sequence analysis
...s: A2Amapper: ATAC, Assembly to Assembly Comparision tool: Comparative mapping between two genome assemblies (same species), or between two different genomes (cross species). Sim4db: Spliced...1035 days ago
ChIPBase: open database for studying the transcription factor binding sites and motifs
...As and protein-coding genes from ChIP-seq data. Our database currently contains ~10,200 curated peak datasets derived from ChIP-seq methods in 10 species.902 days ago
890 days ago
Comparative Genomics Workshops !
...us on commonalities across genomic investigations into humans, model organisms (both traditional and non-traditional), agricultural species, wildlife species and microbes. https://www.ge...874 days ago
Genomicus: genome browser that enables users to navigate in genomes in several dimensions
...hromosome axes, transversaly across different species, and chronologicaly along evo...cestral genome structure in all the ancestral species within the phylogenetic range...stics of Genomicus version 105.01: (view species tree in pdf or ...840 days ago
OneZoom tree of life explorer...
An interactive map of the evolutionary links between all living things known to science. Discover your favourites, see which species are under threat, and be amazed by the diversity of life on earth.584 days ago