Five points for bioinformatics software/tools
In the bioinformatics sector we mostly spend time on computational analysis of huge...type of analysis that you are doing. This is particularly true in the case of genome assembly and annotation. At...3735 days ago
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List of popular bioinformatics software/tools
In current genome era, our day to day work is to handle the huge geneome sequences, expression data, several other datasets. This link provide a comprehensive list of commonly used sofware/tools.3973 days ago
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Which are the best statistical programming languages to study for a bioinformatician?
In Bio-informatics based genome sequencing and predicting metabolic pathways research jobs I used Matlab, SAS, SPSS, R and several Bioconductor packages. Matlab had a l...3979 days ago
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BioRuby :Ruby packages for biologist
BioRuby is a package of Open Source Ruby code, with classes for DNA and protein sequ...for the Ruby language. This project is supported by University of Tokyo (Human Genome Center), Kyoto University(Bio...3974 days ago
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UK Genome Science Meeting, sept 2nd-4th, 2013
Following the success of the last three years' UK Next Gen Sequencing meetings at Nottingham, the newly named UK Genome Science meeting aims to bring...3946 days ago
Livestock Functional Genomics Summer School (LFG 2013)
...the participant should understand the basis and the context of livestock big molecular data, and be able to manipulate high density genotypes, whole genome sequences and transcriptome d...3956 days ago
2013 NextGen Genomics & Bioinformatics Technologies (NGBT) Conference, New Delhi, INDIA
2013 NextGen Genomics & Bioinformatics Technologies (...In the ten years since the first human reference genome was completed for US$3 billio...o great reduction in sequencing cost. Today a human genome can be sequenced for under US...3950 days ago
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Bioinformatician become producer/director !!!
If a Bioinformatician starts producing Hindi Bollywood mo.... BLAST : Eak khoj Munna Bhai Promoter Gene se Genome tak. Maine BLAST kiya. NCBI...ormatician No.1 Mera Naam Tool Developer Hum Apke Genome Mein Rehte Hein Do Seq...3946 days ago
What a bioinformatician always dream for ???
Well established bioinformatics labs with SGI(silicon graphics interface) License of all commercial softwares. Complete, and fully assembled genome of the girl :P A girl/boy wi...3872 days ago
Bioinformatics -- Understanding of living systems through information science
Recently, the progress of the Human Genome Project, aiming to decode all...ation, and this is called the genome. But the amount of informatio...erved between species. If the genome is considered as a long text,...as decoded the natto bacillus genome, through analysis using Keio'...3944 days ago
Translational Bioinformatics: Transforming 300 Billion Points of Data
...ngton DC Local Description: There is an urgent need to translate genome-era discoveries into clinica...f disease in type 2 diabetes, and evaluating patients presenting with whole genomes sequenced. The NIH Wednesd...3938 days ago
Python script to download covid genome !
#!/usr/bin/env python3 # these are the publicly available "complete" sequences # https://www.gisaid.org/ has more (1200?), but they require you to sign up import...1163 days ago
Download genome using NCBI esearch command line !
#Download using command line "NC_005956.1" / "CP003784.1" esearch -db nucleotide -query "NC_005956.1" | efetch -format fasta > seq1.fa esearch -db nucleotide -quer...1129 days ago
Which of the followings are the best place to study Bioinformatics ?
Bioinformatics is a major growth area and qualified Bioinformaticians are in high demand. An explosion in biological data has resulted from genome projects, next generation seq...3444 days ago
Tryst with a Bioinformatician # Dr Altan Kara
Dr Altan Kara is a Bioinformatics specialist at the faculty of Gene Engineer...ng for (AKMARK (Project CODE:5153403)) is, applying a bioinformatics-supported genome, transcriptome, proteome, and...2389 days ago
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Alignment of closely related whole genomes/scaffolds
With the relative ease and low cost of current generation sequencing technologies has led to a dramatic increase in the number of sequenced genomes for species across the tree of life. This increasing volume of data requires tools that can quickly compare multiple whole-genome sequences, millions...Tags: Whole genome, NGS, Genome, Scaffolds, pan-genome, Evolution, Alignments, Compare
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Comment on "Short-read assembly using Spades !"
Short-read asse...the process of constructing a genome sequence from a large number...reads. SPAdes (St. Petersburg genome assembler) is a popular softw...directory where the assembled genome will be saved, "forward_reads...and accuracy of the assembled genome by comparing it to reference...443 days ago
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